Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_15

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
15,152	+				-1.0
15,152	+				-1.7
15,184	+				+0.6
15,184	+				-0.4
15,184	+				-1.7
15,185	-				+0.6
15,187	+				-0.2
15,679	+		Pf1N1B4_14	0.48	-1.6
15,680	-		Pf1N1B4_14	0.48	-1.4
15,680	-		Pf1N1B4_14	0.48	-2.1
16,026	+				-2.3
16,027	-				+0.3
16,455	+		Pf1N1B4_15	0.30	-0.8
16,455	+		Pf1N1B4_15	0.30	-1.0
16,456	-		Pf1N1B4_15	0.30	-2.9
16,456	-		Pf1N1B4_15	0.30	-2.0
16,456	-		Pf1N1B4_15	0.30	-2.1
16,704	+		Pf1N1B4_15	0.48	-1.6
16,704	+		Pf1N1B4_15	0.48	-2.3
16,704	+		Pf1N1B4_15	0.48	-0.7
16,774	+		Pf1N1B4_15	0.53	-1.5
16,775	-		Pf1N1B4_15	0.53	+1.0
17,165	-		Pf1N1B4_15	0.80	-4.9
17,364	+				+1.6
17,365	-				-0.7
17,365	-				-2.9
17,365	-				-1.2
17,365	-				-2.3
17,365	-				-1.2
17,471	-				+0.4
17,823	-		Pf1N1B4_16	0.25	-0.4
17,927	+		Pf1N1B4_16	0.36	+1.4
17,931	-		Pf1N1B4_16	0.37	+0.9
18,271	+		Pf1N1B4_16	0.75	+1.4
18,272	-				+1.0
18,392	+		Pf1N1B4_16	0.89	-2.5
18,392	+		Pf1N1B4_16	0.89	-2.4
18,392	+		Pf1N1B4_16	0.89	-1.2
18,398	-				+0.6
18,398	-		Pf1N1B4_16	0.89	-0.4