Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1402

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
1,605,433	+				-0.1
1,605,434	-				+1.6
1,605,434	-				-2.3
1,605,463	+				-0.1
1,605,463	+				-1.0
1,605,463	+				-1.4
1,605,463	+				-0.7
1,605,463	+				-0.6
1,605,464	-				+0.6
1,605,464	-				+1.1
1,605,464	-				-0.0
1,605,464	-				-0.8
1,605,464	-				-0.7
1,605,535	+				-0.0
1,605,535	+				+0.6
1,605,536	-				+0.2
1,605,536	-				-0.9
1,605,562	+				-0.3
1,605,562	+				+1.4
1,605,562	+				+0.4
1,605,562	+				+1.6
1,605,562	+				-0.2
1,605,562	+				+0.1
1,605,563	-				+1.6
1,605,563	-				+1.0
1,605,563	-				+0.2
1,605,563	-				+1.6
1,605,563	-				+0.8
1,605,563	-				+0.1
1,605,699	-		Pf1N1B4_1402	0.16	-1.9
1,605,706	+		Pf1N1B4_1402	0.17	-1.0
1,605,706	+		Pf1N1B4_1402	0.17	-2.3
1,605,706	+		Pf1N1B4_1402	0.17	+0.5
1,605,706	+		Pf1N1B4_1402	0.17	+0.6
1,605,707	-		Pf1N1B4_1402	0.17	-0.4
1,605,707	-		Pf1N1B4_1402	0.17	-2.4
1,606,316	+				-0.4
1,606,316	+				+1.4
1,606,316	+				-0.0
1,606,316	+				+0.9
1,606,317	-				-0.6
1,606,317	-				-0.3
1,606,317	-				+0.2
1,606,317	-				-0.6
1,606,349	+				-0.6
1,606,350	-				+1.1
1,606,544	+				+1.6
1,606,837	-		Pf1N1B4_1403	0.19	+0.8
1,606,855	+		Pf1N1B4_1403	0.20	+1.6
1,606,856	-		Pf1N1B4_1403	0.20	-0.4
1,606,897	+		Pf1N1B4_1403	0.21	+1.6
1,606,897	+		Pf1N1B4_1403	0.21	+3.6
1,606,897	+		Pf1N1B4_1403	0.21	+2.6
1,606,897	+		Pf1N1B4_1403	0.21	+1.6
1,606,898	-		Pf1N1B4_1403	0.21	+1.2
1,606,898	-		Pf1N1B4_1403	0.21	+1.6
1,606,898	-		Pf1N1B4_1403	0.21	+1.0
1,607,230	+		Pf1N1B4_1403	0.34	-0.2
1,607,231	-		Pf1N1B4_1403	0.34	+3.2
1,607,239	+				+0.6
1,607,240	-		Pf1N1B4_1403	0.34	+1.6
1,607,275	+		Pf1N1B4_1403	0.36	+1.6
1,607,276	-		Pf1N1B4_1403	0.36	-1.4
1,607,276	-		Pf1N1B4_1403	0.36	-0.0