Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4783

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
5,283,722	+		Pf1N1B4_4782	0.49	+0.6
5,283,723	-		Pf1N1B4_4782	0.49	+0.2
5,284,010	+		Pf1N1B4_4782	0.71	+1.0
5,284,112	+		Pf1N1B4_4782	0.78	+0.0
5,284,113	-		Pf1N1B4_4782	0.78	-1.3
5,284,113	-		Pf1N1B4_4782	0.78	-0.4
5,284,475	+				-0.0
5,284,519	+				+1.0
5,284,519	+				-1.1
5,284,520	-				-1.2
5,284,714	-		Pf1N1B4_4783	0.15	-1.2
5,284,974	+		Pf1N1B4_4783	0.41	-0.2
5,284,974	+		Pf1N1B4_4783	0.41	-0.3
5,284,975	-				-1.8
5,284,984	-		Pf1N1B4_4783	0.42	-1.6
5,285,385	+		Pf1N1B4_4783	0.81	-0.4
5,285,385	+		Pf1N1B4_4783	0.81	-0.1
5,285,385	+		Pf1N1B4_4783	0.81	-0.9
5,285,502	+				-0.3
5,285,502	+				-0.2
5,285,531	+				-0.5
5,285,574	+				-0.2
5,285,574	+				-0.4
5,285,574	+				+0.8
5,285,697	+				+1.5
5,285,697	+				-0.5
5,285,698	-				-1.1
5,285,698	-				-0.4
5,285,698	-				-0.6
5,285,702	-				+0.3
5,285,702	-				-0.9
5,285,788	+				-1.2
5,285,788	+				-1.2
5,285,789	-				-0.5
5,285,789	-				+1.3
5,285,804	+				-1.8
5,285,841	-				-0.9
5,285,841	-				+1.3
5,285,867	+				+1.0
5,285,867	+				-1.0
5,286,488	+				-0.1
5,286,566	+		Pf1N1B4_4784	0.44	+0.5
5,286,566	+		Pf1N1B4_4784	0.44	+0.6
5,286,567	-		Pf1N1B4_4784	0.44	-0.8