Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3527

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
3,931,629	+		Pf1N1B4_3525	0.69	+0.2
3,931,629	+		Pf1N1B4_3525	0.69	-1.3
3,931,630	-				-0.9
3,931,948	+				-0.5
3,931,948	+				-0.5
3,931,948	+				+0.2
3,931,949	-				+1.3
3,931,949	-				+2.1
3,931,956	+				-0.8
3,931,956	+				-1.7
3,932,164	-		Pf1N1B4_3526	0.33	-0.3
3,932,352	+		Pf1N1B4_3526	0.62	+1.5
3,932,352	+		Pf1N1B4_3526	0.62	-1.3
3,932,352	+		Pf1N1B4_3526	0.62	+0.1
3,932,352	+		Pf1N1B4_3526	0.62	+0.9
3,932,352	+		Pf1N1B4_3526	0.62	-1.6
3,932,352	+		Pf1N1B4_3526	0.62	-2.1
3,932,352	+		Pf1N1B4_3526	0.62	+0.1
3,932,403	+		Pf1N1B4_3526	0.70	-1.2
3,932,427	+		Pf1N1B4_3526	0.73	+1.1
3,932,608	-				+0.7
3,932,672	-				+0.5
3,932,849	+				-0.1
3,932,850	-		Pf1N1B4_3527	0.29	+0.5
3,932,850	-		Pf1N1B4_3527	0.29	-1.2
3,932,850	-		Pf1N1B4_3527	0.29	+2.1
3,932,932	-		Pf1N1B4_3527	0.40	+0.1
3,932,932	-		Pf1N1B4_3527	0.40	-1.3
3,933,005	+		Pf1N1B4_3527	0.49	-0.1
3,933,030	-		Pf1N1B4_3527	0.52	-1.5
3,933,030	-		Pf1N1B4_3527	0.52	+1.1
3,933,034	-		Pf1N1B4_3527	0.52	-1.2
3,933,080	+		Pf1N1B4_3527	0.58	+0.6
3,933,081	-		Pf1N1B4_3527	0.58	+1.5
3,933,110	+		Pf1N1B4_3527	0.62	-0.7
3,933,351	+				-0.9
3,933,454	-				+1.1
3,933,484	+				+1.5
3,933,484	+				+0.1
3,933,484	+				+1.5
3,933,484	+				+2.3
3,933,484	+				+0.5
3,933,485	-				-0.8
3,933,485	-				-1.0
3,933,773	+		Pf1N1B4_3528	0.27	+0.8
3,933,774	-		Pf1N1B4_3528	0.27	+0.3
3,933,774	-		Pf1N1B4_3528	0.27	+1.0
3,933,774	-		Pf1N1B4_3528	0.27	-0.3
3,933,978	+		Pf1N1B4_3528	0.46	-0.1
3,934,075	+		Pf1N1B4_3528	0.56	+2.6
3,934,075	+		Pf1N1B4_3528	0.56	-0.1
3,934,075	+		Pf1N1B4_3528	0.56	+0.6
3,934,075	+		Pf1N1B4_3528	0.56	+0.7
3,934,075	+		Pf1N1B4_3528	0.56	+0.7
3,934,076	-				+1.2
3,934,352	+		Pf1N1B4_3528	0.82	+3.7
3,934,352	+		Pf1N1B4_3528	0.82	-0.5
3,934,352	+				-1.5
3,934,352	+		Pf1N1B4_3528	0.82	-0.1
3,934,352	+		Pf1N1B4_3528	0.82	+1.6
3,934,352	+		Pf1N1B4_3528	0.82	+1.5
3,934,352	+		Pf1N1B4_3528	0.82	+0.5
3,934,353	-				+0.1
3,934,356	+		Pf1N1B4_3528	0.82	+1.6
3,934,356	+				+2.5
3,934,356	+		Pf1N1B4_3528	0.82	-0.6
3,934,356	+		Pf1N1B4_3528	0.82	-2.2
3,934,357	-		Pf1N1B4_3528	0.82	+0.2