Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2739

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
3,077,487	+		Pf1N1B4_2738	0.25	+1.1
3,077,487	+		Pf1N1B4_2738	0.25	+0.5
3,077,487	+		Pf1N1B4_2738	0.25	-1.5
3,077,488	-		Pf1N1B4_2738	0.25	-1.3
3,077,488	-		Pf1N1B4_2738	0.25	-0.9
3,077,509	-		Pf1N1B4_2738	0.28	+0.3
3,077,523	+		Pf1N1B4_2738	0.29	-1.1
3,077,523	+		Pf1N1B4_2738	0.29	+0.5
3,077,523	+		Pf1N1B4_2738	0.29	+0.1
3,077,524	-		Pf1N1B4_2738	0.29	+0.7
3,077,524	-		Pf1N1B4_2738	0.29	+0.0
3,077,524	-		Pf1N1B4_2738	0.29	-0.8
3,077,553	+		Pf1N1B4_2738	0.32	+2.5
3,077,553	+		Pf1N1B4_2738	0.32	-1.8
3,077,554	-		Pf1N1B4_2738	0.32	+0.9
3,077,751	+		Pf1N1B4_2738	0.54	+0.5
3,077,751	+		Pf1N1B4_2738	0.54	-0.3
3,077,805	+		Pf1N1B4_2738	0.60	-0.4
3,077,805	+		Pf1N1B4_2738	0.60	+0.8
3,077,805	+		Pf1N1B4_2738	0.60	+1.7
3,077,806	-		Pf1N1B4_2738	0.60	+1.5
3,077,806	-		Pf1N1B4_2738	0.60	-1.5
3,077,976	+		Pf1N1B4_2738	0.78	-1.0
3,077,976	+		Pf1N1B4_2738	0.78	+2.3
3,077,976	+		Pf1N1B4_2738	0.78	+0.5
3,077,976	+		Pf1N1B4_2738	0.78	-0.2
3,077,976	+		Pf1N1B4_2738	0.78	-0.5
3,077,977	-		Pf1N1B4_2738	0.78	-0.1
3,077,977	-		Pf1N1B4_2738	0.78	+1.0
3,077,977	-		Pf1N1B4_2738	0.78	-0.7
3,077,977	-		Pf1N1B4_2738	0.78	+1.3
3,077,987	-		Pf1N1B4_2738	0.79	+0.7
3,077,988	+		Pf1N1B4_2738	0.80	+0.2
3,077,988	+		Pf1N1B4_2738	0.80	+0.7
3,077,988	+		Pf1N1B4_2738	0.80	+0.5
3,077,988	+		Pf1N1B4_2738	0.80	+1.0
3,077,988	+				+0.9
3,077,988	+		Pf1N1B4_2738	0.80	-1.1
3,077,988	+		Pf1N1B4_2738	0.80	-0.3
3,077,988	+		Pf1N1B4_2738	0.80	-2.2
3,077,988	+		Pf1N1B4_2738	0.80	-0.2
3,077,988	+		Pf1N1B4_2738	0.80	-0.1
3,077,988	+		Pf1N1B4_2738	0.80	-1.5
3,077,988	+		Pf1N1B4_2738	0.80	+1.1
3,077,988	+		Pf1N1B4_2738	0.80	-1.3
3,077,988	+		Pf1N1B4_2738	0.80	-1.3
3,077,989	-		Pf1N1B4_2738	0.80	-0.4
3,077,989	-		Pf1N1B4_2738	0.80	+0.5
3,078,144	+				-0.5
3,078,145	-				+0.5
3,078,145	-				+0.5
3,078,156	+				-1.0
3,078,156	+				+1.5
3,078,157	-				-1.5
3,078,157	-				+0.4
3,078,157	-				-1.5
3,078,184	+				+2.3
3,078,184	+				+0.0
3,078,184	+				-0.5
3,078,184	+				+1.6
3,078,185	-				+0.8
3,078,185	-				-0.2
3,078,185	-				+0.1
3,078,186	+				+2.7
3,078,186	+				-0.2
3,078,186	+				-2.6
3,078,200	+				+1.5
3,078,200	+				-0.9
3,078,200	+				-1.4
3,078,220	+				-0.1
3,078,220	+				+1.9
3,078,221	-				+1.5
3,078,231	+				+0.5
3,078,231	+				-0.1
3,078,231	+				-1.1
3,078,231	+				+2.9
3,078,231	+				-0.1
3,078,232	-				+1.0
3,078,232	-				+0.1
3,078,232	-				+0.5
3,078,232	-				-1.2
3,078,538	+		Pf1N1B4_2739	0.48	-0.5
3,078,539	-		Pf1N1B4_2739	0.48	-1.0
3,078,593	+		Pf1N1B4_2739	0.57	-1.2
3,078,791	+				-0.7
3,078,792	-				+0.5
3,078,792	-				-0.1
3,078,833	+				-0.1
3,078,851	+				+0.4
3,078,851	+				+1.0
3,078,851	+				+0.5
3,078,851	+				-0.5
3,078,852	-				-0.1
3,078,852	-				-1.3
3,078,852	-				-1.7
3,078,852	-				+0.3
3,078,852	-				+0.9
3,078,879	+				+0.5
3,079,057	-		Pf1N1B4_2740	0.13	-0.9
3,079,127	+		Pf1N1B4_2740	0.21	+0.5
3,079,128	-		Pf1N1B4_2740	0.21	-0.6
3,079,128	-		Pf1N1B4_2740	0.21	-1.3
3,079,166	+		Pf1N1B4_2740	0.26	+0.7
3,079,268	+		Pf1N1B4_2740	0.38	+0.9
3,079,311	+		Pf1N1B4_2740	0.43	-1.2
3,079,312	-		Pf1N1B4_2740	0.43	-0.0
3,079,312	-		Pf1N1B4_2740	0.43	+0.4
3,079,312	-		Pf1N1B4_2740	0.43	-1.0
3,079,445	+		Pf1N1B4_2740	0.58	+0.2
3,079,445	+		Pf1N1B4_2740	0.58	+0.1
3,079,446	-		Pf1N1B4_2740	0.58	+2.9
3,079,475	+		Pf1N1B4_2740	0.61	+0.9
3,079,475	+		Pf1N1B4_2740	0.61	-1.0
3,079,475	+		Pf1N1B4_2740	0.61	+1.8
3,079,475	+		Pf1N1B4_2740	0.61	+1.7
3,079,475	+		Pf1N1B4_2740	0.61	+3.0
3,079,476	-		Pf1N1B4_2740	0.61	+0.8
3,079,476	-		Pf1N1B4_2740	0.61	-1.9
3,079,476	-		Pf1N1B4_2740	0.61	-0.2
3,079,476	-		Pf1N1B4_2740	0.61	+0.5
3,079,476	-		Pf1N1B4_2740	0.61	-2.2
3,079,529	+		Pf1N1B4_2740	0.68	-0.9
3,079,529	+		Pf1N1B4_2740	0.68	+2.0
3,079,529	+		Pf1N1B4_2740	0.68	-0.5
3,079,529	+		Pf1N1B4_2740	0.68	-1.9
3,079,529	+		Pf1N1B4_2740	0.68	-1.0
3,079,529	+		Pf1N1B4_2740	0.68	-0.3
3,079,529	+		Pf1N1B4_2740	0.68	-0.1
3,079,529	+		Pf1N1B4_2740	0.68	+3.0
3,079,529	+		Pf1N1B4_2740	0.68	-0.0
3,079,529	+		Pf1N1B4_2740	0.68	+0.9
3,079,530	-		Pf1N1B4_2740	0.68	-0.7
3,079,530	-		Pf1N1B4_2740	0.68	+0.9
3,079,530	-		Pf1N1B4_2740	0.68	+0.2
3,079,530	-		Pf1N1B4_2740	0.68	+2.6
3,079,530	-		Pf1N1B4_2740	0.68	-1.5
3,079,680	-		Pf1N1B4_2740	0.85	-1.1