Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1576

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,814,310	+		Pf1N1B4_1575	0.28	-2.0
1,814,310	+		Pf1N1B4_1575	0.28	-0.1
1,814,310	+		Pf1N1B4_1575	0.28	-3.1
1,814,310	+		Pf1N1B4_1575	0.28	-1.9
1,814,310	+		Pf1N1B4_1575	0.28	+0.9
1,814,310	+		Pf1N1B4_1575	0.28	-0.5
1,814,310	+		Pf1N1B4_1575	0.28	-0.2
1,814,311	-		Pf1N1B4_1575	0.28	+0.5
1,814,311	-		Pf1N1B4_1575	0.28	+0.1
1,814,311	-		Pf1N1B4_1575	0.28	+0.7
1,814,311	-		Pf1N1B4_1575	0.28	-1.0
1,814,486	+		Pf1N1B4_1575	0.46	-1.4
1,814,523	+		Pf1N1B4_1575	0.50	-0.3
1,814,523	+		Pf1N1B4_1575	0.50	-1.3
1,814,523	+		Pf1N1B4_1575	0.50	-0.9
1,814,523	+		Pf1N1B4_1575	0.50	+2.1
1,814,523	+		Pf1N1B4_1575	0.50	-0.3
1,814,524	-		Pf1N1B4_1575	0.50	-0.7
1,814,524	-		Pf1N1B4_1575	0.50	-0.1
1,814,524	-		Pf1N1B4_1575	0.50	+0.3
1,814,568	+		Pf1N1B4_1575	0.55	-0.8
1,814,568	+		Pf1N1B4_1575	0.55	-1.7
1,814,569	-		Pf1N1B4_1575	0.55	-0.3
1,814,653	-		Pf1N1B4_1575	0.63	+1.5
1,814,758	+		Pf1N1B4_1575	0.74	+0.5
1,814,934	+				+0.2
1,814,934	+				-0.0
1,814,935	+				+1.5
1,814,935	-				-1.3
1,814,935	-				-1.1
1,814,935	-				-0.9
1,814,935	-				-1.2
1,815,050	+				+1.5
1,815,050	+				+1.5
1,815,050	+				-0.9
1,815,050	+				+1.5
1,815,050	+				-0.4
1,815,050	+				+0.6
1,815,050	+				-0.6
1,815,051	-				+0.1
1,815,051	-				-0.1
1,815,051	-				-0.3
1,815,051	-				-0.3
1,815,051	-				-1.4
1,815,051	-				-0.6
1,815,051	-				+1.8
1,815,051	-				-0.1
1,815,054	-				-0.9
1,815,054	-				+1.2
1,815,073	+				-0.4
1,815,073	+				+0.4
1,815,073	+				+3.5
1,815,074	-				+0.6
1,815,074	-				+1.5
1,815,084	+				-0.5
1,815,084	+				-1.9
1,815,085	-				+0.5
1,815,085	-				-0.5
1,815,085	-				+0.3
1,815,085	-				+1.1
1,815,085	-				+0.1
1,815,085	-				-1.3
1,815,143	+				-0.3
1,815,162	-				+4.3
1,815,227	+		Pf1N1B4_1576	0.13	+0.7
1,815,230	+		Pf1N1B4_1576	0.13	-2.1
1,815,230	+		Pf1N1B4_1576	0.13	-0.9
1,815,231	-		Pf1N1B4_1576	0.13	-1.9
1,815,231	-		Pf1N1B4_1576	0.13	-0.3
1,815,369	-		Pf1N1B4_1576	0.28	-1.1
1,815,398	+				+1.5
1,815,398	+		Pf1N1B4_1576	0.32	-0.3
1,815,399	-				+0.9
1,815,399	-		Pf1N1B4_1576	0.32	+0.2
1,815,497	+		Pf1N1B4_1576	0.43	+1.1
1,815,497	+		Pf1N1B4_1576	0.43	+1.5
1,815,497	+		Pf1N1B4_1576	0.43	+0.1
1,815,523	-		Pf1N1B4_1576	0.46	-0.8
1,815,523	-		Pf1N1B4_1576	0.46	-1.7
1,815,803	+		Pf1N1B4_1576	0.77	-2.4
1,815,803	+		Pf1N1B4_1576	0.77	-0.4
1,815,804	-		Pf1N1B4_1576	0.77	+0.2
1,815,804	-		Pf1N1B4_1576	0.77	-0.3
1,816,061	+				-0.7
1,816,061	+				+2.7
1,816,061	+				+2.5
1,816,061	+				+0.1
1,816,062	-				+0.1
1,816,453	+		Pf1N1B4_1577	0.24	-1.3
1,816,454	-		Pf1N1B4_1577	0.24	-1.1
1,816,528	+		Pf1N1B4_1577	0.31	-0.8
1,816,528	+		Pf1N1B4_1577	0.31	+0.6
1,816,528	+				-1.5
1,816,528	+		Pf1N1B4_1577	0.31	-1.3
1,816,528	+		Pf1N1B4_1577	0.31	-1.5
1,816,528	+		Pf1N1B4_1577	0.31	-1.6
1,816,529	-		Pf1N1B4_1577	0.32	-1.5
1,816,529	-		Pf1N1B4_1577	0.32	-0.8
1,816,529	-		Pf1N1B4_1577	0.32	+0.8
1,816,529	-		Pf1N1B4_1577	0.32	-0.0
1,816,529	-		Pf1N1B4_1577	0.32	+1.3
1,816,529	-		Pf1N1B4_1577	0.32	-1.1
1,816,529	-		Pf1N1B4_1577	0.32	-0.8
1,816,804	+		Pf1N1B4_1577	0.60	+1.2
1,816,804	+		Pf1N1B4_1577	0.60	-2.1
1,816,804	+		Pf1N1B4_1577	0.60	-1.9
1,816,805	-		Pf1N1B4_1577	0.60	-0.7
1,816,805	-		Pf1N1B4_1577	0.60	+1.5
1,816,805	-		Pf1N1B4_1577	0.60	-0.7
1,816,805	-		Pf1N1B4_1577	0.60	-1.1
1,816,805	-		Pf1N1B4_1577	0.60	-0.1
1,816,805	-		Pf1N1B4_1577	0.60	-1.2
1,816,805	-		Pf1N1B4_1577	0.60	-1.0
1,816,898	+		Pf1N1B4_1577	0.70	-1.9
1,816,931	+		Pf1N1B4_1577	0.74	-0.3