Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1096

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,228,796	+		Pf1N1B4_1095	0.41	-1.1
1,228,797	-		Pf1N1B4_1095	0.41	-0.8
1,228,816	+		Pf1N1B4_1095	0.42	-0.5
1,228,816	+		Pf1N1B4_1095	0.42	-2.4
1,228,817	-		Pf1N1B4_1095	0.42	-2.1
1,228,817	-		Pf1N1B4_1095	0.42	-0.7
1,228,859	+		Pf1N1B4_1095	0.45	-0.1
1,228,859	+		Pf1N1B4_1095	0.45	-1.1
1,228,860	-		Pf1N1B4_1095	0.45	+1.2
1,228,860	-		Pf1N1B4_1095	0.45	-2.6
1,228,860	-		Pf1N1B4_1095	0.45	-1.7
1,228,860	-		Pf1N1B4_1095	0.45	+0.6
1,228,890	-		Pf1N1B4_1095	0.47	-0.4
1,228,890	-		Pf1N1B4_1095	0.47	-0.1
1,228,890	-		Pf1N1B4_1095	0.47	+2.0
1,228,890	-		Pf1N1B4_1095	0.47	+0.2
1,229,017	+		Pf1N1B4_1095	0.56	+1.5
1,229,039	+		Pf1N1B4_1095	0.58	-0.1
1,229,039	+		Pf1N1B4_1095	0.58	+1.5
1,229,039	+		Pf1N1B4_1095	0.58	-0.1
1,229,040	-		Pf1N1B4_1095	0.58	+0.6
1,229,040	-		Pf1N1B4_1095	0.58	-0.4
1,229,040	-		Pf1N1B4_1095	0.58	-0.5
1,229,040	-		Pf1N1B4_1095	0.58	-0.8
1,229,040	-		Pf1N1B4_1095	0.58	-1.5
1,229,040	-		Pf1N1B4_1095	0.58	-0.3
1,229,040	-		Pf1N1B4_1095	0.58	-0.2
1,229,040	-		Pf1N1B4_1095	0.58	-0.6
1,229,106	-		Pf1N1B4_1095	0.62	+0.2
1,229,154	+		Pf1N1B4_1095	0.66	+0.4
1,229,154	+		Pf1N1B4_1095	0.66	+1.5
1,229,155	-		Pf1N1B4_1095	0.66	-2.2
1,229,288	+				+1.5
1,229,288	+		Pf1N1B4_1095	0.75	+1.5
1,229,288	+		Pf1N1B4_1095	0.75	+0.5
1,229,288	+		Pf1N1B4_1095	0.75	-0.8
1,229,288	+				+0.5
1,229,288	+		Pf1N1B4_1095	0.75	+3.1
1,229,288	+		Pf1N1B4_1095	0.75	+1.5
1,229,288	+		Pf1N1B4_1095	0.75	-0.8
1,229,288	+		Pf1N1B4_1095	0.75	+2.5
1,229,288	+		Pf1N1B4_1095	0.75	+0.3
1,229,289	-		Pf1N1B4_1095	0.75	-2.0
1,229,289	-		Pf1N1B4_1095	0.75	-1.1
1,229,289	-		Pf1N1B4_1095	0.75	+0.1
1,229,289	-		Pf1N1B4_1095	0.75	-1.1
1,229,289	-		Pf1N1B4_1095	0.75	-1.3
1,229,289	-		Pf1N1B4_1095	0.75	-1.1
1,229,289	-		Pf1N1B4_1095	0.75	-2.1
1,229,289	-		Pf1N1B4_1095	0.75	-0.8
1,229,289	-		Pf1N1B4_1095	0.75	-2.7
1,229,289	-		Pf1N1B4_1095	0.75	-2.0
1,229,289	-		Pf1N1B4_1095	0.75	-0.1
1,229,289	-		Pf1N1B4_1095	0.75	-0.8
1,229,289	-		Pf1N1B4_1095	0.75	-0.3
1,229,289	-		Pf1N1B4_1095	0.75	+0.3
1,229,289	-		Pf1N1B4_1095	0.75	-1.8
1,229,289	-		Pf1N1B4_1095	0.75	-0.9
1,229,289	-		Pf1N1B4_1095	0.75	-0.3
1,229,289	-		Pf1N1B4_1095	0.75	+0.9
1,229,289	-		Pf1N1B4_1095	0.75	+0.9
1,229,289	-		Pf1N1B4_1095	0.75	-2.5
1,229,289	-		Pf1N1B4_1095	0.75	+1.5
1,229,289	-		Pf1N1B4_1095	0.75	-0.3
1,229,289	-		Pf1N1B4_1095	0.75	+0.9
1,229,289	-		Pf1N1B4_1095	0.75	-1.2
1,229,289	-		Pf1N1B4_1095	0.75	-1.8
1,229,298	-		Pf1N1B4_1095	0.75	-1.9
1,229,529	+				-1.1
1,229,529	+				-2.2
1,229,529	+				-0.5
1,229,530	-				+0.4
1,229,530	-				+2.5
1,229,530	-				-0.9
1,229,530	-				-0.1
1,229,531	+				+1.5
1,229,531	+				-0.1
1,229,531	+				+1.9
1,229,531	+				-1.9
1,229,531	+				-0.5
1,229,531	+				-1.3
1,229,531	+				+0.5
1,229,531	+				+0.1
1,229,531	+				+1.9
1,229,531	+				+0.1
1,229,531	+				+0.7
1,229,531	+				-1.0
1,229,531	+				+0.5
1,229,531	+				+0.5
1,229,531	+				+0.9
1,229,531	+				-0.1
1,229,532	-				-1.9
1,229,532	-				-2.0
1,229,532	-				-1.1
1,229,532	-				+0.8
1,229,532	-				-1.9
1,229,532	-				-0.7
1,229,532	-				-1.3
1,229,532	-				-1.3
1,229,532	-				+0.7
1,229,532	-				-1.7
1,229,532	-				-0.6
1,229,532	-				-2.0
1,229,532	-				-1.5
1,229,532	-				-0.1
1,229,532	-				-0.1
1,229,532	-				-1.3
1,229,532	-				+1.5
1,229,532	-				-0.1
1,229,532	-				-1.2
1,229,532	-				-0.5
1,229,532	-				+1.5
1,229,532	-				-1.6
1,229,532	-				+0.8
1,229,532	-				+0.5
1,229,532	-				+0.9
1,229,532	-				-1.7
1,229,532	-				+0.6
1,229,532	-				+1.5
1,229,532	-				-1.2
1,229,532	-				-0.3
1,229,532	-				-1.0
1,229,532	-				-2.0
1,229,532	-				-1.1
1,229,532	-				-0.7
1,229,532	-				-0.9
1,229,532	-				-2.1
1,229,532	-				+0.5
1,229,532	-				-1.4
1,229,532	-				-0.1
1,229,532	-				-0.5
1,229,532	-				+0.7
1,229,532	-				-0.5
1,229,532	-				-2.9
1,229,532	-				+1.1
1,229,532	-				-0.9
1,229,532	-				+0.5
1,229,532	-				-2.8
1,229,532	-				-0.1
1,229,532	-				-0.5
1,229,532	-				+1.5
1,229,532	-				-1.6
1,229,532	-				-1.2
1,229,532	-				-0.9
1,229,532	-				-0.7
1,229,532	-				-0.9
1,229,532	-				-1.9
1,229,532	-				+0.7
1,229,532	-				-0.2
1,229,532	-				-0.2
1,229,532	-				-1.8
1,229,532	-				+0.5
1,229,532	-				-1.5
1,229,532	-				-2.3
1,229,532	-				+1.5
1,229,532	-				-0.3
1,229,532	-				-1.1
1,229,532	-				-0.8
1,229,532	-				-1.1
1,229,532	-				-1.5
1,229,532	-				+1.9
1,229,532	-				-0.7
1,229,532	-				-1.9
1,229,705	+				-0.9
1,229,705	+				+0.4
1,229,743	+				+0.6
1,229,743	+				-1.5
1,229,761	+				-1.1
1,229,761	+				-0.9
1,229,804	+		Pf1N1B4_1096	0.15	+0.9
1,229,804	+		Pf1N1B4_1096	0.15	+0.1
1,229,804	+		Pf1N1B4_1096	0.15	+0.5
1,229,804	+		Pf1N1B4_1096	0.15	-0.8
1,230,024	+		Pf1N1B4_1096	0.52	-0.1
1,230,024	+		Pf1N1B4_1096	0.52	-1.7
1,230,024	+		Pf1N1B4_1096	0.52	+1.5
1,230,024	+		Pf1N1B4_1096	0.52	-0.1
1,230,024	+		Pf1N1B4_1096	0.52	-3.0
1,230,024	+		Pf1N1B4_1096	0.52	-2.3
1,230,024	+		Pf1N1B4_1096	0.52	+2.1
1,230,024	+		Pf1N1B4_1096	0.52	+0.3
1,230,024	+		Pf1N1B4_1096	0.52	-0.7
1,230,025	-		Pf1N1B4_1096	0.52	-0.2
1,230,025	-		Pf1N1B4_1096	0.52	-0.7
1,230,179	+		Pf1N1B4_1096	0.78	+1.1
1,230,179	+		Pf1N1B4_1096	0.78	+0.5
1,230,179	+		Pf1N1B4_1096	0.78	-1.3
1,230,179	+		Pf1N1B4_1096	0.78	+0.2
1,230,179	+		Pf1N1B4_1096	0.78	+0.7
1,230,179	+		Pf1N1B4_1096	0.78	+0.5
1,230,179	+		Pf1N1B4_1096	0.78	+2.1
1,230,179	+		Pf1N1B4_1096	0.78	-1.1
1,230,180	-		Pf1N1B4_1096	0.78	+1.1
1,230,296	+				-0.1
1,230,296	+				-0.3
1,230,297	-				-0.7
1,230,297	-				-0.1
1,230,345	+				-0.5
1,230,345	+				-0.7
1,230,345	+				-0.3
1,230,345	+				+0.8
1,230,345	+				+2.8
1,230,345	+				+1.5
1,230,345	+				-0.5
1,230,345	+				+0.7
1,230,345	+				+3.5
1,230,400	+				+0.5
1,230,412	+				+0.5