Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4000

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1
4,447,259	+				-0.7
4,447,260	-				+0.4
4,447,260	-				-0.9
4,447,274	+				+2.2
4,447,274	+				+0.0
4,447,399	-				+1.0
4,447,414	-				-2.3
4,447,440	+				+0.6
4,447,462	+				+0.8
4,447,482	+				+2.5
4,447,483	-				+0.8
4,447,483	-				+0.6
4,447,483	-				-0.8
4,447,977	+				+1.8
4,447,994	+				-1.1
4,447,994	+				-1.1
4,447,995	-				-1.4
4,448,058	+				+0.3
4,448,059	-				+0.2
4,448,059	-				+0.0
4,448,383	-		Pf1N1B4_4000	0.27	-1.0
4,448,419	-		Pf1N1B4_4000	0.29	-0.1
4,449,103	-		Pf1N1B4_4000	0.76	-0.3
4,449,124	-		Pf1N1B4_4000	0.77	-0.8
4,449,124	-		Pf1N1B4_4000	0.77	+0.3
4,449,124	-		Pf1N1B4_4000	0.77	-1.7
4,449,240	+		Pf1N1B4_4000	0.85	-0.7
4,449,240	+		Pf1N1B4_4000	0.85	-2.8
4,449,241	-		Pf1N1B4_4000	0.85	-0.3
4,449,241	-		Pf1N1B4_4000	0.85	+1.6
4,449,241	-				+1.6
4,449,241	-		Pf1N1B4_4000	0.85	+0.9
4,449,279	-		Pf1N1B4_4000	0.88	-0.6
4,449,282	+		Pf1N1B4_4000	0.88	-0.6
4,449,282	+		Pf1N1B4_4000	0.88	-0.7
4,449,453	+				+0.6
4,449,453	+				+1.2
4,449,453	+				-0.4
4,449,485	+				+0.6
4,449,485	+				+0.3
4,449,485	+				-0.5
4,449,486	-				+0.8
4,449,486	-				-1.2
4,449,526	+				-1.3
4,449,527	-				+0.0
4,449,831	+		Pf1N1B4_4001	0.30	+1.6
4,449,831	+		Pf1N1B4_4001	0.30	-2.4
4,450,329	+		Pf1N1B4_4001	0.71	-0.2
4,450,329	+		Pf1N1B4_4001	0.71	-1.4
4,450,330	-		Pf1N1B4_4001	0.71	-2.0