Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1990

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1
2,274,426	+		Pf1N1B4_1988	0.86	+0.2
2,274,427	-		Pf1N1B4_1988	0.86	+1.0
2,274,624	-		Pf1N1B4_1989	0.12	-0.7
2,275,485	-		Pf1N1B4_1990	0.31	+1.7
2,275,485	-		Pf1N1B4_1990	0.31	-1.1
2,275,673	+		Pf1N1B4_1990	0.52	-0.1
2,275,674	-		Pf1N1B4_1990	0.52	+0.2
2,275,792	+		Pf1N1B4_1990	0.65	-0.2
2,275,792	+				+0.0
2,275,792	+		Pf1N1B4_1990	0.65	+0.6
2,275,793	-		Pf1N1B4_1990	0.65	-0.4
2,275,793	-		Pf1N1B4_1990	0.65	+0.6
2,275,793	-		Pf1N1B4_1990	0.65	-1.9
2,275,793	-		Pf1N1B4_1990	0.65	-0.6
2,275,793	-		Pf1N1B4_1990	0.65	-1.0
2,275,815	-		Pf1N1B4_1990	0.67	-1.2
2,275,919	+		Pf1N1B4_1990	0.79	+0.5
2,275,919	+		Pf1N1B4_1990	0.79	+0.2
2,275,920	-		Pf1N1B4_1990	0.79	-0.4
2,275,932	+		Pf1N1B4_1990	0.80	+1.5
2,275,932	+		Pf1N1B4_1990	0.80	-1.2
2,275,932	+		Pf1N1B4_1990	0.80	+0.4
2,275,932	+		Pf1N1B4_1990	0.80	-1.0
2,275,932	+		Pf1N1B4_1990	0.80	+0.6
2,275,932	+		Pf1N1B4_1990	0.80	-1.2
2,275,932	+		Pf1N1B4_1990	0.80	+0.3
2,275,932	+		Pf1N1B4_1990	0.80	+0.2
2,275,932	+		Pf1N1B4_1990	0.80	+0.9
2,275,932	+		Pf1N1B4_1990	0.80	-1.0
2,275,932	+		Pf1N1B4_1990	0.80	+0.6
2,275,932	+		Pf1N1B4_1990	0.80	+0.6
2,275,932	+		Pf1N1B4_1990	0.80	+2.3
2,275,932	+		Pf1N1B4_1990	0.80	-0.7
2,275,932	+		Pf1N1B4_1990	0.80	+1.6
2,275,933	-		Pf1N1B4_1990	0.81	+0.7
2,275,933	-		Pf1N1B4_1990	0.81	+1.0
2,275,933	-		Pf1N1B4_1990	0.81	-0.2
2,275,933	-		Pf1N1B4_1990	0.81	+1.3
2,276,343	+		Pf1N1B4_1991	0.12	-0.6
2,276,343	+		Pf1N1B4_1991	0.12	-0.1
2,276,343	+		Pf1N1B4_1991	0.12	+1.6
2,276,344	-		Pf1N1B4_1991	0.12	+1.0
2,276,344	-		Pf1N1B4_1991	0.12	-0.4
2,276,344	-		Pf1N1B4_1991	0.12	+0.1
2,276,344	-		Pf1N1B4_1991	0.12	+1.0
2,276,344	-		Pf1N1B4_1991	0.12	-0.9
2,276,344	-		Pf1N1B4_1991	0.12	-0.2
2,276,344	-		Pf1N1B4_1991	0.12	-1.3
2,276,426	-		Pf1N1B4_1991	0.19	-1.2
2,276,438	+		Pf1N1B4_1991	0.20	-0.6
2,276,439	-		Pf1N1B4_1991	0.20	+0.3
2,276,941	-		Pf1N1B4_1991	0.62	+1.6