Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_906

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
1,032,884	+				+1.4
1,032,884	+		Pf1N1B4_905	0.11	+1.4
1,032,884	+		Pf1N1B4_905	0.11	-1.7
1,032,884	+		Pf1N1B4_905	0.11	-0.7
1,032,884	+				-0.2
1,032,884	+		Pf1N1B4_905	0.11	-1.3
1,032,885	-		Pf1N1B4_905	0.11	-1.0
1,032,885	-		Pf1N1B4_905	0.11	+1.1
1,032,885	-		Pf1N1B4_905	0.11	-0.3
1,032,885	-		Pf1N1B4_905	0.11	-0.8
1,032,911	+		Pf1N1B4_905	0.13	+0.7
1,032,911	+		Pf1N1B4_905	0.13	+1.0
1,032,911	+		Pf1N1B4_905	0.13	+0.4
1,032,911	+		Pf1N1B4_905	0.13	+2.1
1,032,911	+		Pf1N1B4_905	0.13	-0.9
1,032,911	+		Pf1N1B4_905	0.13	+0.1
1,032,911	+		Pf1N1B4_905	0.13	+0.1
1,032,912	-		Pf1N1B4_905	0.14	-0.2
1,032,912	-		Pf1N1B4_905	0.14	-2.1
1,032,912	-		Pf1N1B4_905	0.14	+0.8
1,032,912	-		Pf1N1B4_905	0.14	-1.6
1,032,912	-		Pf1N1B4_905	0.14	-0.9
1,032,912	-		Pf1N1B4_905	0.14	-0.2
1,032,992	+		Pf1N1B4_905	0.21	+0.3
1,032,992	+		Pf1N1B4_905	0.21	-1.8
1,032,992	+		Pf1N1B4_905	0.21	-0.3
1,032,993	-		Pf1N1B4_905	0.22	-1.4
1,032,993	-		Pf1N1B4_905	0.22	+0.1
1,033,280	+		Pf1N1B4_905	0.50	+2.4
1,033,280	+		Pf1N1B4_905	0.50	-0.0
1,033,280	+		Pf1N1B4_905	0.50	+0.1
1,033,281	-		Pf1N1B4_905	0.50	-0.8
1,033,281	-		Pf1N1B4_905	0.50	+0.5
1,033,281	-		Pf1N1B4_905	0.50	-0.4
1,033,281	-		Pf1N1B4_905	0.50	-0.3
1,033,281	-		Pf1N1B4_905	0.50	-0.2
1,033,281	-		Pf1N1B4_905	0.50	+0.5
1,033,281	-		Pf1N1B4_905	0.50	+0.0
1,033,281	-		Pf1N1B4_905	0.50	+0.6
1,033,281	-		Pf1N1B4_905	0.50	+0.4
1,033,281	-		Pf1N1B4_905	0.50	-1.6
1,033,281	-		Pf1N1B4_905	0.50	+0.8
1,033,325	+		Pf1N1B4_905	0.55	-0.2
1,033,469	+		Pf1N1B4_905	0.69	+0.6
1,033,557	-		Pf1N1B4_905	0.78	-0.4
1,033,580	+		Pf1N1B4_905	0.80	-2.2
1,033,581	-		Pf1N1B4_905	0.80	-0.3
1,033,663	+		Pf1N1B4_905	0.88	-1.4
1,033,663	+		Pf1N1B4_905	0.88	+1.4
1,033,664	-		Pf1N1B4_905	0.88	-1.2
1,033,664	-		Pf1N1B4_905	0.88	-0.5
1,033,664	-		Pf1N1B4_905	0.88	+0.9
1,033,664	-		Pf1N1B4_905	0.88	-0.9
1,033,793	+				-2.3
1,033,794	-				-0.1
1,033,794	-				-0.1
1,033,794	-				-1.2
1,033,794	-				-1.4
1,033,794	-				-0.5
1,033,794	-				-0.2
1,033,794	-				-0.1
1,033,794	-				-0.5
1,033,942	+		Pf1N1B4_906	0.46	-1.9
1,033,987	+		Pf1N1B4_906	0.59	-1.6
1,033,987	+		Pf1N1B4_906	0.59	-0.7
1,033,987	+		Pf1N1B4_906	0.59	+0.4
1,033,988	-		Pf1N1B4_906	0.59	-1.4
1,034,032	+		Pf1N1B4_906	0.72	-2.1
1,034,032	+		Pf1N1B4_906	0.72	+0.3
1,034,032	+		Pf1N1B4_906	0.72	-1.8
1,034,033	-		Pf1N1B4_906	0.72	-0.2
1,034,088	-		Pf1N1B4_906	0.88	-0.1
1,034,128	+				+0.2
1,034,136	-				+2.4
1,034,168	+				+0.9
1,034,169	-				+0.8
1,034,193	-				+0.0
1,034,563	+		Pf1N1B4_907	0.33	-1.3
1,034,564	-		Pf1N1B4_907	0.33	+1.4
1,034,564	-		Pf1N1B4_907	0.33	-1.2
1,034,713	-		Pf1N1B4_907	0.49	-0.1
1,034,757	+		Pf1N1B4_907	0.54	-1.1
1,034,758	-		Pf1N1B4_907	0.54	-2.6
1,035,002	+		Pf1N1B4_907	0.80	-1.3
1,035,003	-		Pf1N1B4_907	0.80	+0.4
1,035,003	-		Pf1N1B4_907	0.80	+1.1
1,035,003	-		Pf1N1B4_907	0.80	+1.1
1,035,003	-		Pf1N1B4_907	0.80	+2.4
1,035,006	+		Pf1N1B4_907	0.80	-0.8
1,035,006	+		Pf1N1B4_907	0.80	+0.9
1,035,006	+		Pf1N1B4_907	0.80	-0.7
1,035,007	-		Pf1N1B4_907	0.80	-0.6
1,035,007	-		Pf1N1B4_907	0.80	-0.9
1,035,007	-		Pf1N1B4_907	0.80	+0.0
1,035,007	-		Pf1N1B4_907	0.80	+0.2
1,035,007	-		Pf1N1B4_907	0.80	-1.2