Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5402

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
134,698	+		Pf1N1B4_5401	0.34	+1.4
134,699	-		Pf1N1B4_5401	0.34	-0.6
134,699	-		Pf1N1B4_5401	0.34	-2.3
134,863	+		Pf1N1B4_5401	0.46	+3.4
134,864	-		Pf1N1B4_5401	0.46	+0.4
134,900	-		Pf1N1B4_5401	0.49	-0.9
135,039	+		Pf1N1B4_5401	0.59	-0.7
135,040	-		Pf1N1B4_5401	0.59	+0.1
135,043	+		Pf1N1B4_5401	0.59	+0.2
135,043	+		Pf1N1B4_5401	0.59	-1.2
135,074	+		Pf1N1B4_5401	0.61	+0.2
135,099	+		Pf1N1B4_5401	0.63	+0.0
135,100	-		Pf1N1B4_5401	0.63	-4.2
135,100	-		Pf1N1B4_5401	0.63	+0.4
135,119	-		Pf1N1B4_5401	0.65	-0.3
135,430	+		Pf1N1B4_5401	0.87	-0.2
135,430	+		Pf1N1B4_5401	0.87	-0.1
135,430	+		Pf1N1B4_5401	0.87	-0.2
135,431	-		Pf1N1B4_5401	0.87	+0.2
135,431	-		Pf1N1B4_5401	0.87	-0.4
135,448	+		Pf1N1B4_5401	0.88	-2.8
135,449	-		Pf1N1B4_5401	0.88	+0.6
135,482	+				-0.9
135,482	+				-1.2
135,482	+				+0.5
135,482	+				+0.1
135,482	+				+2.0
135,482	+				+0.1
135,482	+				-1.8
135,483	-				-0.2
135,483	-				-0.1
135,483	-				+0.1
135,483	-				-1.4
135,483	-				-1.2
135,491	-				-0.0
135,491	-				-1.4
135,491	-				+0.0
135,625	+				-0.0
135,625	+				-0.4
135,625	+				-0.2
135,626	-				+0.6
135,631	-				-1.6
135,692	+		Pf1N1B4_5402	0.29	-2.2
135,692	+		Pf1N1B4_5402	0.29	-0.4
135,693	-				+0.2
135,693	-		Pf1N1B4_5402	0.30	-1.3
135,693	-		Pf1N1B4_5402	0.30	-0.9
135,748	+		Pf1N1B4_5402	0.49	-0.6
135,808	+				-0.8
135,809	-		Pf1N1B4_5402	0.71	-0.2
135,809	-		Pf1N1B4_5402	0.71	+1.0
135,919	-				-2.1
135,940	-				-1.8
135,994	-				-1.6
135,994	-				+0.8
135,994	-				+0.1
136,011	-				+0.4
136,011	-				-1.9
136,050	+				-0.2
136,050	+				+1.0
136,051	-				-2.2
136,051	-				+0.9
136,138	+				-2.3
136,139	-				+0.8
136,261	-				-0.2
136,261	-				+1.1
136,307	+				-1.2
136,307	+				+0.6
136,308	-				-0.2
136,308	-				-0.3
136,308	-				+0.6
136,308	-				-2.2
136,309	+				-1.5
136,353	+				-0.2
136,448	+				-0.4
136,449	-				+0.1
136,449	-				+0.0
136,449	-				-1.9
136,449	-				-0.6
136,555	+				-1.1
136,555	+				-0.9
136,555	+				-1.8
136,555	+				+0.4
136,555	+				-0.4
136,555	+				-2.3
136,555	+				-1.1
136,556	-				+0.1
136,556	-				-1.7
136,556	-				+0.0
136,559	+				+0.1
136,559	+				-0.9
136,559	+				+0.8
136,559	+				+1.1
136,559	+				+0.7
136,559	+				+0.7
136,559	+				+0.8
136,559	+				-1.1
136,559	+				-1.1
136,559	+				+1.4
136,560	-				+2.0
136,560	-				-0.8
136,560	-				-1.9
136,560	-				-1.8
136,560	-				-0.8
136,560	-				-1.8
136,560	-				+1.4
136,560	-				+0.1
136,768	+				-0.6
136,768	+				-0.0
136,768	+				-0.2
136,768	+				-0.2
136,768	+				+1.4
136,769	-				+3.0
136,769	-				-1.6
136,861	+				-0.9
136,861	+				+0.9
136,862	-				-0.7
136,888	+				+0.4
136,888	+				-1.6
136,888	+				+0.3
136,888	+				+1.3
136,888	+				-1.2
136,888	+				+0.7
136,888	+				-2.1
136,888	+				+1.0
136,888	+				-0.4
136,888	+				-0.5
136,889	-				-1.1
136,889	-				-0.6
136,889	-				-0.3
136,892	+				-0.4
136,892	+				+0.7
136,892	+				-0.2
136,892	+				-0.6
136,892	+				-0.4
136,892	+				+0.4
136,892	+				-0.4
136,892	+				+0.1