Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4920

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
5,450,993	+				+0.0
5,451,095	+		Pf1N1B4_4919	0.72	-1.0
5,451,308	+				+0.1
5,451,309	-				-0.8
5,451,460	+				-0.3
5,451,461	-				+0.6
5,451,473	+				-0.7
5,451,473	+				-0.4
5,451,474	-				+1.0
5,451,474	-				+0.3
5,451,474	-				-0.2
5,451,474	-				-0.2
5,451,474	-				-1.0
5,451,474	-				-0.4
5,451,474	-				+0.3
5,451,476	+				-0.2
5,451,477	-				-1.2
5,451,480	+				-0.0
5,451,481	-				-1.5
5,451,481	-				+0.2
5,451,481	-				-1.7
5,451,524	+				+0.8
5,451,579	+				-1.8
5,451,622	-				-1.9
5,451,688	+				+0.8
5,451,757	-		Pf1N1B4_4920	0.12	-0.4
5,451,893	+		Pf1N1B4_4920	0.22	-0.9
5,451,913	+		Pf1N1B4_4920	0.23	-0.8
5,452,225	+		Pf1N1B4_4920	0.44	-1.2
5,452,519	+		Pf1N1B4_4920	0.64	-0.9
5,452,687	+		Pf1N1B4_4920	0.76	+0.2
5,452,688	-		Pf1N1B4_4920	0.76	-0.9
5,452,934	-				-1.2
5,453,288	-				-1.0
5,453,419	+				-0.8
5,453,420	-				+0.9
5,453,772	-		Pf1N1B4_4921	0.39	-0.7
5,453,774	+		Pf1N1B4_4921	0.39	-0.4
5,453,775	-		Pf1N1B4_4921	0.39	+0.1
5,454,041	+		Pf1N1B4_4921	0.79	-0.5