Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4459

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
4,918,662	+		Pf1N1B4_4458	0.41	-0.5
4,918,662	+				-1.3
4,918,663	-		Pf1N1B4_4458	0.41	+1.4
4,919,095	+		Pf1N1B4_4458	0.71	-0.4
4,919,430	+				+0.6
4,919,430	+				+1.0
4,919,431	-				+0.5
4,919,648	-		Pf1N1B4_4459	0.19	-1.5
4,919,797	+		Pf1N1B4_4459	0.41	-1.5
4,919,797	+				-1.0
4,919,797	+				-0.9
4,919,798	-		Pf1N1B4_4459	0.41	+1.6
4,920,235	-				+0.8
4,920,285	-				-0.1
4,920,384	+				+0.9
4,920,384	+				+1.1
4,920,385	-				+0.0
4,920,404	+				-0.3
4,920,404	+				+0.9
4,920,469	+		Pf1N1B4_4460	0.15	+0.7
4,920,673	+		Pf1N1B4_4460	0.50	+0.8
4,920,743	-		Pf1N1B4_4460	0.62	-0.1
4,921,049	+				-0.3
4,921,050	-				-1.3
4,921,050	-				-2.7
4,921,050	-				+0.1
4,921,050	-				+0.1