Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4235

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
4,693,033	-		Pf1N1B4_4234	0.36	-0.9
4,693,122	+		Pf1N1B4_4234	0.43	+0.6
4,693,247	+		Pf1N1B4_4234	0.52	-0.2
4,693,248	-		Pf1N1B4_4234	0.52	-0.4
4,693,348	-		Pf1N1B4_4234	0.60	-0.4
4,693,587	+		Pf1N1B4_4234	0.77	-1.0
4,693,587	+		Pf1N1B4_4234	0.77	-0.0
4,693,587	+		Pf1N1B4_4234	0.77	-0.1
4,693,588	-				-1.0
4,693,594	+		Pf1N1B4_4234	0.78	-1.0
4,693,990	+				-2.1
4,694,238	-		Pf1N1B4_4235	0.26	-0.3
4,694,366	+		Pf1N1B4_4235	0.39	-1.3
4,694,366	+		Pf1N1B4_4235	0.39	+0.7
4,694,417	+		Pf1N1B4_4235	0.45	-2.0
4,694,618	+		Pf1N1B4_4235	0.65	-0.9
4,694,827	-		Pf1N1B4_4235	0.87	-0.7
4,694,965	-				-0.7
4,695,433	-		Pf1N1B4_4236	0.48	-0.1
4,695,511	+		Pf1N1B4_4236	0.56	-0.2
4,695,511	+		Pf1N1B4_4236	0.56	+1.4
4,695,511	+		Pf1N1B4_4236	0.56	+2.3
4,695,512	-		Pf1N1B4_4236	0.57	-0.1
4,695,512	-		Pf1N1B4_4236	0.57	+0.2
4,695,515	+		Pf1N1B4_4236	0.57	+0.3
4,695,515	+		Pf1N1B4_4236	0.57	+1.3
4,695,515	+				-0.6
4,695,515	+		Pf1N1B4_4236	0.57	+0.8
4,695,515	+		Pf1N1B4_4236	0.57	+0.1
4,695,515	+		Pf1N1B4_4236	0.57	-1.2
4,695,516	-		Pf1N1B4_4236	0.57	+0.3
4,695,516	-		Pf1N1B4_4236	0.57	+0.3
4,695,516	-		Pf1N1B4_4236	0.57	-1.3
4,695,516	-		Pf1N1B4_4236	0.57	+0.3
4,695,516	-		Pf1N1B4_4236	0.57	-0.3
4,695,516	-		Pf1N1B4_4236	0.57	-0.5
4,695,516	-		Pf1N1B4_4236	0.57	-2.0
4,695,516	-		Pf1N1B4_4236	0.57	-0.3
4,695,516	-		Pf1N1B4_4236	0.57	-0.4
4,695,561	+		Pf1N1B4_4236	0.62	+0.3
4,695,561	+		Pf1N1B4_4236	0.62	-0.3
4,695,561	+		Pf1N1B4_4236	0.62	-1.0
4,695,561	+		Pf1N1B4_4236	0.62	-0.3
4,695,562	-		Pf1N1B4_4236	0.62	+1.1
4,695,562	-		Pf1N1B4_4236	0.62	-1.5
4,695,805	+		Pf1N1B4_4236	0.88	-0.1
4,695,806	-		Pf1N1B4_4236	0.88	-0.3
4,695,806	-		Pf1N1B4_4236	0.88	-0.0