Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4177

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
4,624,764	+		Pf1N1B4_4176	0.11	+0.3
4,624,764	+		Pf1N1B4_4176	0.11	-0.1
4,625,036	+				+1.3
4,625,036	+		Pf1N1B4_4176	0.39	+0.0
4,625,036	+		Pf1N1B4_4176	0.39	+0.1
4,625,076	-		Pf1N1B4_4176	0.43	-0.7
4,625,076	-		Pf1N1B4_4176	0.43	-1.3
4,625,276	+		Pf1N1B4_4176	0.63	+0.0
4,625,555	-				-0.6
4,625,643	+				+1.6
4,625,644	-				-0.7
4,625,644	-				-1.3
4,625,644	-				+0.6
4,625,644	-				+0.3
4,625,825	+		Pf1N1B4_4177	0.20	-1.5
4,625,826	-		Pf1N1B4_4177	0.20	-0.6
4,626,056	+		Pf1N1B4_4177	0.51	-0.1
4,626,057	-		Pf1N1B4_4177	0.51	-1.0
4,626,389	+				+0.3
4,626,425	+				+0.1
4,626,453	+				-0.9
4,626,453	+				-1.0
4,626,695	-				+0.3
4,626,754	+				-0.5
4,626,794	-		Pf1N1B4_4178	0.12	-0.5
4,626,922	+		Pf1N1B4_4178	0.19	-0.8
4,626,923	-		Pf1N1B4_4178	0.19	-0.4
4,627,025	+		Pf1N1B4_4178	0.24	-0.4
4,627,027	+		Pf1N1B4_4178	0.25	-1.8
4,627,068	-		Pf1N1B4_4178	0.27	+0.0
4,627,068	-		Pf1N1B4_4178	0.27	+0.3
4,627,126	+		Pf1N1B4_4178	0.30	-0.3
4,627,198	-		Pf1N1B4_4178	0.34	-0.4
4,627,361	+		Pf1N1B4_4178	0.43	+0.5
4,627,362	-				-0.7