Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2792

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
3,137,062	+				-0.0
3,137,062	+				-1.9
3,137,063	-				-0.2
3,137,077	-				-0.9
3,137,078	+				-1.8
3,137,078	+				-0.5
3,137,079	-				-0.1
3,137,142	+				+0.7
3,137,142	+				-0.2
3,137,142	+				+1.4
3,137,142	+				+3.0
3,137,142	+				-1.3
3,137,143	-				+0.3
3,137,143	-				+0.7
3,137,172	+		Pf1N1B4_2791	0.12	+0.4
3,137,173	-		Pf1N1B4_2791	0.12	-0.3
3,137,243	+		Pf1N1B4_2791	0.26	+1.1
3,137,529	+		Pf1N1B4_2791	0.85	+0.2
3,137,529	+		Pf1N1B4_2791	0.85	-1.9
3,137,529	+		Pf1N1B4_2791	0.85	+0.4
3,137,742	+				-0.2
3,137,742	+				+1.5
3,137,742	+				+0.4
3,137,742	+				-2.6
3,137,742	+				+0.1
3,137,743	-				+0.1
3,137,743	-				+0.6
3,137,743	-				+1.4
3,137,769	+				-1.1
3,137,769	+				-0.3
3,137,769	+				+1.1
3,137,769	+				-0.3
3,137,769	+				-0.4
3,137,769	+				-0.5
3,137,770	-				+1.4
3,137,770	-				+1.0
3,137,770	-				-0.9
3,137,770	-				-2.0
3,137,770	-				+0.0
3,137,829	+				-0.8
3,137,829	+				-0.5
3,137,829	+				+1.4
3,137,829	+				-1.0
3,137,830	-				+0.1
3,137,830	-				+1.3
3,137,830	-				-0.6
3,137,887	-		Pf1N1B4_2792	0.28	-1.6
3,137,947	+		Pf1N1B4_2792	0.48	-0.6
3,137,948	-		Pf1N1B4_2792	0.48	-2.6
3,137,948	-		Pf1N1B4_2792	0.48	-0.4
3,137,948	-		Pf1N1B4_2792	0.48	-0.5
3,137,948	-		Pf1N1B4_2792	0.48	-0.4
3,138,023	+		Pf1N1B4_2792	0.73	+0.4
3,138,023	+		Pf1N1B4_2792	0.73	-0.8
3,138,023	+		Pf1N1B4_2792	0.73	-0.7
3,138,023	+		Pf1N1B4_2792	0.73	-1.8
3,138,023	+		Pf1N1B4_2792	0.73	-1.8
3,138,023	+		Pf1N1B4_2792	0.73	-1.9
3,138,076	+				-0.0
3,138,142	-				-0.7
3,138,242	+				+2.7
3,138,243	-				-2.4
3,138,243	-				+0.7
3,138,611	-		Pf1N1B4_2793	0.61	+1.1
3,138,652	+		Pf1N1B4_2793	0.68	+0.8
3,138,653	-		Pf1N1B4_2793	0.68	-0.9
3,138,751	+		Pf1N1B4_2793	0.84	+0.1
3,138,751	+		Pf1N1B4_2793	0.84	+0.1
3,138,751	+		Pf1N1B4_2793	0.84	-1.3
3,138,751	+		Pf1N1B4_2793	0.84	+0.7
3,138,751	+		Pf1N1B4_2793	0.84	-0.2
3,138,752	-				+0.8
3,138,752	-		Pf1N1B4_2793	0.84	-0.3
3,138,752	-		Pf1N1B4_2793	0.84	+1.4
3,138,752	-		Pf1N1B4_2793	0.84	+1.6
3,138,752	-		Pf1N1B4_2793	0.84	-2.6
3,138,812	+				-1.2
3,138,813	-				-1.2
3,138,813	-				-1.0
3,138,818	+				-0.6
3,138,847	+				+1.8
3,138,848	-				-1.2
3,138,848	-				-0.6
3,138,997	-				-0.2
3,138,997	-				+0.6
3,138,997	-				+0.2
3,139,045	+		Pf1N1B4_2794	0.20	+0.4
3,139,046	-		Pf1N1B4_2794	0.21	+1.8