Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1782

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
2,034,349	-				+0.1
2,034,349	-				+0.1
2,034,349	-				-0.6
2,034,368	+				-2.1
2,034,452	+				+0.7
2,034,452	+				+0.7
2,034,452	+				-1.4
2,034,453	-				-1.2
2,034,517	+				+0.1
2,034,517	+				-1.0
2,034,517	+				-1.9
2,034,517	+				-0.6
2,034,567	+				+0.2
2,034,783	-		Pf1N1B4_1781	0.26	-1.2
2,034,967	+		Pf1N1B4_1781	0.87	-0.3
2,034,967	+		Pf1N1B4_1781	0.87	-1.2
2,034,968	-		Pf1N1B4_1781	0.87	-0.3
2,034,999	+				-1.1
2,034,999	+				-2.1
2,034,999	+				+0.4
2,034,999	+				+2.1
2,035,000	-				+1.4
2,035,000	-				-0.8
2,035,000	-				+2.4
2,035,008	+				+1.4
2,035,008	+				-0.3
2,035,008	+				-1.7
2,035,008	+				-0.2
2,035,008	+				-0.6
2,035,008	+				+0.8
2,035,008	+				+3.0
2,035,009	-				+0.4
2,035,009	-				-1.2
2,035,012	+				-0.3
2,035,012	+				+0.8
2,035,013	-				-1.2
2,035,013	-				-1.2
2,035,013	-				-0.2
2,035,096	+				+0.4
2,035,097	-				-0.2
2,035,097	-				+0.8
2,035,097	-				-0.4
2,035,097	-				-1.8
2,035,097	-				+0.4
2,035,097	-				+0.9
2,035,100	+				-1.1
2,035,100	+				+0.3
2,035,100	+				+0.4
2,035,101	-				-0.5
2,035,101	-				-0.2
2,035,101	-				+0.2
2,035,101	-				-1.0
2,035,101	-				-0.6
2,035,101	-				-1.4
2,035,101	-				-0.1
2,035,101	-				-1.2
2,035,117	-				+1.6
2,035,141	+				-0.2
2,035,141	+				+3.4
2,035,141	+				-3.0
2,035,142	-				+0.1
2,035,142	-				-0.5
2,035,142	-				-0.4
2,035,142	-				+0.4
2,035,143	+				-0.5
2,035,143	+				+0.4
2,035,143	+				-0.4
2,035,144	-				-1.4
2,035,144	-				-0.3
2,035,144	-				+1.0
2,035,144	-				-0.2
2,035,144	-				+0.4
2,035,173	+				+1.0
2,035,173	+				-0.2
2,035,173	+				+1.1
2,035,173	+				+0.2
2,035,174	-				-0.8
2,035,174	-				+0.1
2,035,174	-				-0.1
2,035,174	-				-0.8
2,035,174	-				+2.1
2,035,174	-				+1.4
2,035,174	-				-2.6
2,035,174	-				+0.2
2,035,174	-				-0.4
2,035,188	+				-1.4
2,035,189	-				+0.3
2,035,189	-				-0.4
2,035,193	-				+1.7
2,035,193	-				-1.6
2,035,193	-				+0.6
2,035,193	-				-1.4
2,035,248	+				-0.6
2,035,249	-				+0.6
2,035,249	-				+0.6
2,035,249	-				-0.6
2,035,249	-				-0.6
2,035,249	-				+1.4
2,035,249	-				+1.0
2,035,249	-				-1.4
2,035,249	-				+0.1
2,035,249	-				-0.9
2,035,249	-				-0.8
2,035,273	-				-1.3
2,035,297	-				+0.0
2,035,297	-				-0.6
2,035,400	-		Pf1N1B4_1782	0.39	-0.3
2,035,456	-		Pf1N1B4_1782	0.70	+0.2
2,035,456	-		Pf1N1B4_1782	0.70	-2.8
2,035,456	-		Pf1N1B4_1782	0.70	-0.6
2,035,456	-		Pf1N1B4_1782	0.70	-0.6
2,035,524	+				-0.3
2,035,524	+				-0.3
2,035,524	+				+0.4
2,035,524	+				-1.2
2,035,525	-				-0.5
2,035,525	-				+0.1
2,035,525	-				+0.2
2,035,525	-				-0.5
2,035,597	+				-1.9
2,035,597	+				-1.8
2,035,597	+				+1.4
2,035,597	+				+0.1
2,035,597	+				-1.3
2,035,597	+				-0.2
2,035,597	+				+0.4
2,035,597	+				-0.6
2,035,598	-				+1.4
2,035,598	-				+0.4
2,035,598	-				-0.7
2,035,598	-				+0.3
2,035,598	-				-0.0
2,035,598	-				-0.9
2,035,598	-				+2.2
2,035,598	-				+1.4
2,035,598	-				+0.8
2,035,598	-				+0.6
2,035,598	-				+0.5
2,035,598	-				-0.2
2,035,598	-				+0.2
2,035,598	-				-0.6
2,035,605	+				-1.9
2,035,651	+				-0.4
2,035,651	+				+0.3
2,035,651	+				-0.2
2,035,651	+				-0.3
2,035,652	-				+0.1
2,035,652	-				-1.2
2,035,652	-				+0.1
2,035,652	-				-0.7
2,035,652	-				+1.8
2,035,653	+				-0.1
2,035,653	+				+0.4
2,035,653	+				+0.1
2,035,653	+				+0.6
2,035,653	+				+1.4
2,035,654	-				+1.7
2,035,654	-				-0.4
2,035,654	-				-0.2
2,035,654	-				-1.8
2,035,654	-				-0.6
2,035,654	-				-1.8
2,035,707	+		Pf1N1B4_1783	0.12	-2.3
2,035,707	+		Pf1N1B4_1783	0.12	-1.2
2,035,737	+		Pf1N1B4_1783	0.15	-1.1
2,035,737	+		Pf1N1B4_1783	0.15	+1.7
2,035,737	+		Pf1N1B4_1783	0.15	-0.9
2,035,738	-		Pf1N1B4_1783	0.15	-0.2
2,035,743	+		Pf1N1B4_1783	0.16	-0.0
2,035,743	+		Pf1N1B4_1783	0.16	+0.9
2,035,743	+		Pf1N1B4_1783	0.16	+1.0
2,035,743	+		Pf1N1B4_1783	0.16	-0.3
2,035,743	+		Pf1N1B4_1783	0.16	-1.2
2,035,744	-		Pf1N1B4_1783	0.16	+0.3
2,035,744	-		Pf1N1B4_1783	0.16	-0.3
2,035,744	-		Pf1N1B4_1783	0.16	-0.2
2,035,744	-		Pf1N1B4_1783	0.16	-2.6
2,035,749	+		Pf1N1B4_1783	0.16	-0.8
2,035,749	+		Pf1N1B4_1783	0.16	-0.4
2,035,749	+		Pf1N1B4_1783	0.16	+0.7
2,035,749	+		Pf1N1B4_1783	0.16	+0.7
2,035,749	+		Pf1N1B4_1783	0.16	-0.4
2,035,749	+		Pf1N1B4_1783	0.16	-0.0
2,035,749	+		Pf1N1B4_1783	0.16	+1.4
2,035,750	-		Pf1N1B4_1783	0.16	-0.7
2,035,750	-		Pf1N1B4_1783	0.16	-0.6
2,035,750	-		Pf1N1B4_1783	0.16	-0.4
2,035,750	-		Pf1N1B4_1783	0.16	+0.5
2,035,750	-		Pf1N1B4_1783	0.16	+0.5
2,035,750	-		Pf1N1B4_1783	0.16	-2.9
2,035,750	-		Pf1N1B4_1783	0.16	-1.1
2,035,750	-		Pf1N1B4_1783	0.16	-0.8
2,035,750	-		Pf1N1B4_1783	0.16	+0.2
2,035,768	-		Pf1N1B4_1783	0.18	-2.2
2,035,768	-		Pf1N1B4_1783	0.18	+1.1
2,035,980	+		Pf1N1B4_1783	0.39	+0.0
2,035,980	+		Pf1N1B4_1783	0.39	+1.1
2,035,980	+		Pf1N1B4_1783	0.39	-1.4
2,035,980	+		Pf1N1B4_1783	0.39	+0.1
2,036,056	-		Pf1N1B4_1783	0.47	-0.0
2,036,063	+		Pf1N1B4_1783	0.48	+1.4
2,036,063	+		Pf1N1B4_1783	0.48	+0.6
2,036,064	-		Pf1N1B4_1783	0.48	-0.4
2,036,064	-		Pf1N1B4_1783	0.48	-1.8
2,036,068	-		Pf1N1B4_1783	0.48	-2.4
2,036,068	-		Pf1N1B4_1783	0.48	+1.8
2,036,068	-		Pf1N1B4_1783	0.48	-1.9
2,036,146	+		Pf1N1B4_1783	0.56	-0.1
2,036,146	+		Pf1N1B4_1783	0.56	+1.4
2,036,147	-		Pf1N1B4_1783	0.56	+0.8
2,036,165	-		Pf1N1B4_1783	0.58	+0.4
2,036,210	-		Pf1N1B4_1783	0.63	-0.9
2,036,241	-		Pf1N1B4_1783	0.66	+2.0
2,036,241	-		Pf1N1B4_1783	0.66	+0.9
2,036,278	+		Pf1N1B4_1783	0.69	+0.1
2,036,326	-		Pf1N1B4_1783	0.74	+1.1
2,036,329	+		Pf1N1B4_1783	0.75	-0.5
2,036,329	+		Pf1N1B4_1783	0.75	-0.4
2,036,330	-		Pf1N1B4_1783	0.75	+0.1
2,036,330	-		Pf1N1B4_1783	0.75	+0.4
2,036,330	-		Pf1N1B4_1783	0.75	-0.4
2,036,331	+		Pf1N1B4_1783	0.75	+1.1
2,036,332	-		Pf1N1B4_1783	0.75	+0.6
2,036,332	-		Pf1N1B4_1783	0.75	-0.7
2,036,332	-		Pf1N1B4_1783	0.75	+1.4
2,036,364	-		Pf1N1B4_1783	0.78	+2.1
2,036,403	+		Pf1N1B4_1783	0.82	-1.8
2,036,403	+		Pf1N1B4_1783	0.82	-0.5
2,036,404	-		Pf1N1B4_1783	0.82	-1.1
2,036,404	-		Pf1N1B4_1783	0.82	+1.7
2,036,404	-		Pf1N1B4_1783	0.82	-0.4