Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1464

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
1,677,893	-		Pf1N1B4_1463	0.32	-1.2
1,677,992	-		Pf1N1B4_1463	0.40	-0.2
1,677,992	-		Pf1N1B4_1463	0.40	-0.9
1,677,998	+		Pf1N1B4_1463	0.41	+2.4
1,677,999	-		Pf1N1B4_1463	0.41	-0.6
1,677,999	-		Pf1N1B4_1463	0.41	+2.4
1,677,999	-		Pf1N1B4_1463	0.41	-0.6
1,678,059	+		Pf1N1B4_1463	0.46	-0.6
1,678,060	-		Pf1N1B4_1463	0.46	-0.8
1,678,060	-		Pf1N1B4_1463	0.46	-1.4
1,678,060	-		Pf1N1B4_1463	0.46	-1.2
1,678,060	-		Pf1N1B4_1463	0.46	-1.8
1,678,060	-		Pf1N1B4_1463	0.46	-0.6
1,678,060	-		Pf1N1B4_1463	0.46	+0.1
1,678,091	+		Pf1N1B4_1463	0.49	+1.4
1,678,092	-		Pf1N1B4_1463	0.49	-2.3
1,678,092	-		Pf1N1B4_1463	0.49	+0.4
1,678,092	-		Pf1N1B4_1463	0.49	-1.4
1,678,092	-		Pf1N1B4_1463	0.49	+0.4
1,678,092	-		Pf1N1B4_1463	0.49	+1.4
1,678,092	-		Pf1N1B4_1463	0.49	-0.2
1,678,092	-		Pf1N1B4_1463	0.49	-0.6
1,678,092	-		Pf1N1B4_1463	0.49	+1.4
1,678,092	-		Pf1N1B4_1463	0.49	-1.8
1,678,092	-		Pf1N1B4_1463	0.49	-0.8
1,678,092	-		Pf1N1B4_1463	0.49	+0.8
1,678,092	-		Pf1N1B4_1463	0.49	-0.3
1,678,109	+		Pf1N1B4_1463	0.50	-1.8
1,678,110	-		Pf1N1B4_1463	0.50	-1.8
1,678,110	-		Pf1N1B4_1463	0.50	-0.6
1,678,180	-		Pf1N1B4_1463	0.56	-0.2
1,678,180	-		Pf1N1B4_1463	0.56	+0.8
1,678,180	-		Pf1N1B4_1463	0.56	+0.3
1,678,180	-		Pf1N1B4_1463	0.56	-2.5
1,678,180	-		Pf1N1B4_1463	0.56	+0.4
1,678,200	-				+0.4
1,678,200	-		Pf1N1B4_1463	0.58	-2.4
1,678,200	-		Pf1N1B4_1463	0.58	-0.7
1,678,340	-		Pf1N1B4_1463	0.69	-1.2
1,678,352	+		Pf1N1B4_1463	0.70	+0.4
1,678,352	+		Pf1N1B4_1463	0.70	+1.4
1,678,352	+		Pf1N1B4_1463	0.70	-0.6
1,678,353	-		Pf1N1B4_1463	0.70	-2.4
1,678,353	-		Pf1N1B4_1463	0.70	-1.2
1,678,353	-		Pf1N1B4_1463	0.70	-2.6
1,678,353	-		Pf1N1B4_1463	0.70	-1.6
1,678,386	-		Pf1N1B4_1463	0.73	-0.9
1,678,386	-		Pf1N1B4_1463	0.73	+0.3
1,678,386	-		Pf1N1B4_1463	0.73	-1.9
1,678,515	+		Pf1N1B4_1463	0.83	-0.8
1,678,816	+				-0.6
1,678,816	+				-0.6
1,678,817	-				-1.6
1,678,817	-				-0.4
1,678,817	-				+0.7
1,678,886	-		Pf1N1B4_1464	0.11	-0.2
1,678,886	-		Pf1N1B4_1464	0.11	-0.3
1,678,901	-		Pf1N1B4_1464	0.13	-2.1
1,678,901	-		Pf1N1B4_1464	0.13	-1.6
1,678,989	+		Pf1N1B4_1464	0.23	-0.9
1,678,990	-		Pf1N1B4_1464	0.23	-0.2
1,678,990	-		Pf1N1B4_1464	0.23	-2.5
1,678,990	-		Pf1N1B4_1464	0.23	-1.6
1,679,062	+		Pf1N1B4_1464	0.31	-1.2
1,679,062	+		Pf1N1B4_1464	0.31	-0.9
1,679,062	+		Pf1N1B4_1464	0.31	+0.1
1,679,063	-		Pf1N1B4_1464	0.31	-1.3
1,679,063	-		Pf1N1B4_1464	0.31	-3.0
1,679,063	-		Pf1N1B4_1464	0.31	-2.6
1,679,063	-		Pf1N1B4_1464	0.31	-0.9
1,679,063	-		Pf1N1B4_1464	0.31	-1.5
1,679,063	-		Pf1N1B4_1464	0.31	+0.6
1,679,063	-		Pf1N1B4_1464	0.31	-1.1
1,679,063	-		Pf1N1B4_1464	0.31	-0.7
1,679,112	+		Pf1N1B4_1464	0.36	-1.7
1,679,132	+		Pf1N1B4_1464	0.38	+0.4
1,679,133	-		Pf1N1B4_1464	0.38	-0.1
1,679,161	+		Pf1N1B4_1464	0.42	+1.4
1,679,162	-		Pf1N1B4_1464	0.42	+0.4
1,679,162	-		Pf1N1B4_1464	0.42	-2.3
1,679,162	-		Pf1N1B4_1464	0.42	-0.2
1,679,236	+		Pf1N1B4_1464	0.50	+0.4
1,679,237	-		Pf1N1B4_1464	0.50	-0.8
1,679,237	-		Pf1N1B4_1464	0.50	-0.9
1,679,331	-		Pf1N1B4_1464	0.60	-0.6
1,679,361	-		Pf1N1B4_1464	0.63	+3.4
1,679,361	-		Pf1N1B4_1464	0.63	-0.0
1,679,361	-		Pf1N1B4_1464	0.63	-1.2
1,679,426	-		Pf1N1B4_1464	0.71	-0.6
1,679,426	-		Pf1N1B4_1464	0.71	-1.9
1,679,426	-		Pf1N1B4_1464	0.71	-1.3
1,679,499	-		Pf1N1B4_1464	0.79	-1.1
1,679,499	-		Pf1N1B4_1464	0.79	-0.1
1,679,499	-		Pf1N1B4_1464	0.79	-0.7
1,679,499	-		Pf1N1B4_1464	0.79	-1.6
1,679,598	+		Pf1N1B4_1464	0.89	+1.4
1,679,599	-		Pf1N1B4_1464	0.90	+0.8
1,679,599	-		Pf1N1B4_1464	0.90	-0.3
1,679,645	-				-0.2
1,679,648	+				-0.5
1,679,648	+				+1.4
1,679,649	-				-0.2
1,679,649	-				-0.1
1,679,649	-				-0.9
1,679,649	-				+0.9
1,679,649	-				-1.3
1,679,649	-				-2.1
1,679,649	-				-2.2
1,679,649	-				+0.2
1,679,649	-				+1.7
1,679,649	-				-0.8
1,679,649	-				+0.2
1,679,649	-				-0.1
1,679,649	-				-2.1
1,679,649	-				+0.1
1,679,649	-				-3.7
1,679,649	-				-1.0
1,679,650	+				-0.9
1,679,650	+				+0.4
1,679,650	+				+0.4
1,679,651	-				-0.2
1,679,651	-				-0.0
1,679,741	+				-1.2
1,679,742	-				-0.1
1,679,742	-				-0.6
1,679,742	-				-0.2
1,679,742	-				+1.7
1,679,742	-				-0.1
1,679,742	-				-0.8
1,679,876	+		Pf1N1B4_1465	0.11	+0.4
1,679,877	-		Pf1N1B4_1465	0.11	-0.4
1,679,877	-		Pf1N1B4_1465	0.11	+0.6
1,679,877	-		Pf1N1B4_1465	0.11	-0.1
1,679,877	-		Pf1N1B4_1465	0.11	+1.9
1,679,877	-		Pf1N1B4_1465	0.11	-0.4
1,679,877	-		Pf1N1B4_1465	0.11	+0.8
1,679,877	-		Pf1N1B4_1465	0.11	-0.7
1,679,880	-		Pf1N1B4_1465	0.11	-0.5
1,679,892	-		Pf1N1B4_1465	0.12	-1.5
1,679,892	-		Pf1N1B4_1465	0.12	-0.3
1,679,892	-		Pf1N1B4_1465	0.12	+0.1
1,679,892	-		Pf1N1B4_1465	0.12	-0.5
1,679,923	-		Pf1N1B4_1465	0.14	-1.3
1,679,923	-		Pf1N1B4_1465	0.14	-0.6
1,679,923	-		Pf1N1B4_1465	0.14	-0.3
1,679,923	-		Pf1N1B4_1465	0.14	-0.1
1,679,923	-		Pf1N1B4_1465	0.14	+0.3
1,680,306	-		Pf1N1B4_1465	0.36	-1.7
1,680,306	-		Pf1N1B4_1465	0.36	-0.8
1,680,306	-		Pf1N1B4_1465	0.36	-0.5
1,680,306	-		Pf1N1B4_1465	0.36	+0.2
1,680,321	-		Pf1N1B4_1465	0.37	-0.8
1,680,321	-		Pf1N1B4_1465	0.37	-0.9
1,680,321	-		Pf1N1B4_1465	0.37	-0.5
1,680,368	+		Pf1N1B4_1465	0.39	+2.0
1,680,369	-		Pf1N1B4_1465	0.39	-1.3
1,680,369	-		Pf1N1B4_1465	0.39	+0.7
1,680,369	-		Pf1N1B4_1465	0.39	-1.2
1,680,369	-		Pf1N1B4_1465	0.39	-1.8
1,680,369	-		Pf1N1B4_1465	0.39	-0.6
1,680,517	+		Pf1N1B4_1465	0.48	-0.9
1,680,517	+		Pf1N1B4_1465	0.48	-0.6
1,680,517	+		Pf1N1B4_1465	0.48	-0.6
1,680,518	-		Pf1N1B4_1465	0.48	-0.1
1,680,518	-		Pf1N1B4_1465	0.48	-1.6
1,680,518	-		Pf1N1B4_1465	0.48	+0.4
1,680,518	-		Pf1N1B4_1465	0.48	-1.6
1,680,518	-		Pf1N1B4_1465	0.48	-0.4
1,680,518	-		Pf1N1B4_1465	0.48	-0.4
1,680,518	-		Pf1N1B4_1465	0.48	-1.1
1,680,518	-		Pf1N1B4_1465	0.48	+0.0
1,680,518	-		Pf1N1B4_1465	0.48	+0.3
1,680,518	-		Pf1N1B4_1465	0.48	-0.3
1,680,518	-		Pf1N1B4_1465	0.48	+0.4
1,680,518	-		Pf1N1B4_1465	0.48	+1.1
1,680,518	-		Pf1N1B4_1465	0.48	-0.6
1,680,518	-		Pf1N1B4_1465	0.48	-0.2
1,680,518	-		Pf1N1B4_1465	0.48	+0.2
1,680,518	-		Pf1N1B4_1465	0.48	-0.1
1,680,518	-		Pf1N1B4_1465	0.48	-3.2
1,680,530	+		Pf1N1B4_1465	0.48	+0.4
1,680,530	+		Pf1N1B4_1465	0.48	-0.6
1,680,531	-		Pf1N1B4_1465	0.48	-0.8
1,680,531	-		Pf1N1B4_1465	0.48	-1.0
1,680,531	-		Pf1N1B4_1465	0.48	-1.9
1,680,531	-		Pf1N1B4_1465	0.48	-0.2
1,680,531	-		Pf1N1B4_1465	0.48	+0.5
1,680,531	-		Pf1N1B4_1465	0.48	-0.3
1,680,597	-		Pf1N1B4_1465	0.52	-0.4
1,680,597	-		Pf1N1B4_1465	0.52	-2.5
1,680,597	-		Pf1N1B4_1465	0.52	-1.4
1,680,597	-		Pf1N1B4_1465	0.52	-1.3
1,680,597	-		Pf1N1B4_1465	0.52	-0.6
1,680,597	-		Pf1N1B4_1465	0.52	-0.3
1,680,597	-		Pf1N1B4_1465	0.52	-0.3
1,680,662	+		Pf1N1B4_1465	0.56	+1.0
1,680,663	-		Pf1N1B4_1465	0.56	-0.7
1,680,663	-		Pf1N1B4_1465	0.56	-0.2
1,680,684	+		Pf1N1B4_1465	0.57	-0.2
1,680,685	-		Pf1N1B4_1465	0.57	-0.7
1,680,685	-		Pf1N1B4_1465	0.57	-2.8
1,680,685	-		Pf1N1B4_1465	0.57	-0.2