Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_124

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
134,675	+		Pf1N1B4_122	0.87	-0.8
134,676	-				-0.2
134,772	+				+1.4
134,772	+				+0.1
134,772	+				-1.2
134,773	-				-1.8
134,894	-				-0.2
135,011	-		Pf1N1B4_123	0.27	+0.4
135,011	-		Pf1N1B4_123	0.27	-0.3
135,311	-				+0.2
135,389	-				+0.7
135,389	-				+0.6
135,394	+				+0.6
135,403	-				+0.4
135,403	-				-0.8
135,425	+				-0.3
135,526	+				+0.0
135,735	+		Pf1N1B4_124	0.11	-0.7
136,647	+		Pf1N1B4_124	0.74	-0.7
136,647	+		Pf1N1B4_124	0.74	-0.1
136,648	-		Pf1N1B4_124	0.74	-2.4
136,648	-		Pf1N1B4_124	0.74	-0.1
137,040	+				+0.0
137,041	-				-0.5
137,043	+				+1.4
137,044	-				+0.8
137,044	-				-0.8
137,060	+				+0.1
137,061	-				-1.5
137,061	-				-2.6
137,061	-				-1.6
137,128	-				-0.1
137,189	+				-0.3
137,189	+				-0.7
137,197	+				+2.9
137,197	+				-2.0
137,197	+				-0.2
137,197	+				-0.4
137,197	+				-1.4
137,198	-				-1.4
137,198	-				-0.2
137,198	-				-1.5
137,198	-				+0.7
137,198	-				+0.4
137,214	+				-0.6
137,215	-				-0.0
137,238	+				+1.1
137,239	-				+0.4
137,239	-				+0.3
137,695	-		Pf1N1B4_125	0.77	-0.6
137,834	-				-1.1
137,834	-				+0.8
137,924	+				-1.5
137,955	-				-3.0
137,955	-				+0.4