Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_122

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
132,349	+		Pf1N1B4_121	0.16	+0.1
132,349	+		Pf1N1B4_121	0.16	+0.1
132,350	-		Pf1N1B4_121	0.16	-0.0
132,524	+		Pf1N1B4_121	0.31	-1.6
132,641	-		Pf1N1B4_121	0.42	-0.7
132,856	+		Pf1N1B4_121	0.61	+0.2
132,968	+		Pf1N1B4_121	0.71	-0.5
133,429	+				+0.3
133,833	+		Pf1N1B4_122	0.34	-0.8
133,834	-		Pf1N1B4_122	0.34	-0.6
133,930	-		Pf1N1B4_122	0.40	-1.5
133,975	-		Pf1N1B4_122	0.43	-1.0
134,187	+		Pf1N1B4_122	0.56	-1.8
134,293	-		Pf1N1B4_122	0.63	+0.8
134,675	+		Pf1N1B4_122	0.87	-0.8
134,676	-				-0.2
134,772	+				+1.4
134,772	+				+0.1
134,772	+				-1.2
134,773	-				-1.8
134,894	-				-0.2
135,011	-		Pf1N1B4_123	0.27	+0.4
135,011	-		Pf1N1B4_123	0.27	-0.3
135,311	-				+0.2
135,389	-				+0.7
135,389	-				+0.6
135,394	+				+0.6
135,403	-				+0.4
135,403	-				-0.8
135,425	+				-0.3
135,526	+				+0.0
135,735	+		Pf1N1B4_124	0.11	-0.7