Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5621

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
46,128	+				+5.5
46,128	+		Pf1N1B4_5619	0.46	+5.4
46,129	-		Pf1N1B4_5619	0.46	+5.1
46,485	-				+5.7
46,493	-				+4.8
46,522	+				+5.5
46,580	+				+0.5
46,647	-				-2.1
46,837	-		Pf1N1B4_5620	0.48	+2.1
46,856	-		Pf1N1B4_5620	0.52	-1.3
46,889	-		Pf1N1B4_5620	0.59	+0.6
47,135	+				+0.4
47,136	-				+2.0
47,273	-		Pf1N1B4_5621	0.27	-1.2
47,766	-				+0.4
47,891	+				+0.3
47,958	+				-1.0
47,958	+				+1.3
48,084	+				+0.6
48,084	+				+0.3
48,140	+				-0.6
48,140	+				+0.9
48,262	+				-1.2
48,262	+				+0.9
48,271	+				-0.4
48,271	+				+0.7
48,272	-				-0.8
48,272	-				-2.1
48,272	-				-0.7
48,307	-				+1.6
48,559	-				-0.6
48,761	+		Pf1N1B4_5622	0.28	-0.3
48,807	-		Pf1N1B4_5622	0.32	+0.4