Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5264

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
21,904	+		Pf1N1B4_5262	0.73	+0.1
21,904	+		Pf1N1B4_5262	0.73	-2.7
21,904	+		Pf1N1B4_5262	0.73	-2.0
21,905	-		Pf1N1B4_5262	0.73	+0.5
21,905	-		Pf1N1B4_5262	0.73	+0.5
21,905	-		Pf1N1B4_5262	0.73	+0.0
21,905	-		Pf1N1B4_5262	0.73	+2.5
21,941	+		Pf1N1B4_5262	0.81	-1.2
21,941	+		Pf1N1B4_5262	0.81	-1.8
21,943	+		Pf1N1B4_5262	0.81	-0.7
21,944	-		Pf1N1B4_5262	0.81	-0.5
21,944	-		Pf1N1B4_5262	0.81	+3.3
21,961	+		Pf1N1B4_5262	0.85	+0.9
22,078	-				+0.8
22,104	+				+0.0
22,105	-				-0.5
22,105	-				-1.4
22,159	+				-0.7
22,159	+				-0.5
22,160	-				+0.3
22,162	+				-1.3
22,162	+				+0.0
22,162	+				+0.6
22,162	+				+2.5
22,162	+				+0.1
22,527	+				+1.6
22,528	-				-0.8
22,541	+				-0.8
22,541	+				+1.8
22,542	-				+0.1
22,542	-				-0.6
22,542	-				+1.2
22,542	-				-1.5
22,604	+		Pf1N1B4_5263	0.39	+0.3
22,604	+		Pf1N1B4_5263	0.39	+0.6
22,605	-		Pf1N1B4_5263	0.40	-1.6
22,605	-		Pf1N1B4_5263	0.40	-1.8
22,605	-		Pf1N1B4_5263	0.40	-2.2
22,605	-		Pf1N1B4_5263	0.40	+0.6
22,605	-		Pf1N1B4_5263	0.40	+1.8
22,605	-		Pf1N1B4_5263	0.40	-0.1
22,605	-		Pf1N1B4_5263	0.40	-1.2
22,605	-		Pf1N1B4_5263	0.40	-1.0
22,605	-		Pf1N1B4_5263	0.40	-0.3
22,605	-		Pf1N1B4_5263	0.40	-0.7
22,670	+		Pf1N1B4_5263	0.73	+1.9
22,671	-		Pf1N1B4_5263	0.73	+3.1
22,671	-				-0.8
22,671	-				+0.1
22,671	-		Pf1N1B4_5263	0.73	-0.2
22,718	-				-0.7
22,718	-				+0.5
22,797	+		Pf1N1B4_5264	0.47	+1.3
22,798	-				-0.1
22,878	+				-1.0
22,879	-				-1.3
22,879	-				-0.8
22,905	-				-0.8
22,906	+				-1.0
22,907	-				+1.6
22,907	-				+0.3
22,938	-				+0.2
22,958	-				+0.7
22,974	-				+0.3
23,042	-				-0.1
23,042	-				+0.1
23,042	-				+1.5
23,042	-				+0.9
23,042	-				+0.5
23,077	-				+2.0
23,077	-				+0.2
23,211	-		Pf1N1B4_5265	0.33	-0.2
23,211	-		Pf1N1B4_5265	0.33	+0.7
23,211	-		Pf1N1B4_5265	0.33	-0.7
23,251	+		Pf1N1B4_5265	0.64	+0.4
23,252	-		Pf1N1B4_5265	0.65	-0.5
23,252	-		Pf1N1B4_5265	0.65	+0.7
23,252	-		Pf1N1B4_5265	0.65	-0.7
23,252	-		Pf1N1B4_5265	0.65	-1.3
23,252	-		Pf1N1B4_5265	0.65	-0.8
23,312	+				-0.3
23,312	+				+0.5
23,313	-				-0.0
23,313	-				+2.5
23,398	+		Pf1N1B4_5266	0.25	+0.5
23,399	-		Pf1N1B4_5266	0.25	-0.8
23,533	-		Pf1N1B4_5266	0.67	-0.2
23,533	-		Pf1N1B4_5266	0.67	-0.4
23,686	+				-0.8
23,687	-				-1.0
23,693	-				+0.1
23,810	+				+0.1
23,840	+				+0.6
23,840	+				+0.2
23,841	-				-0.3
23,841	-				+1.0
23,841	-				-0.1