Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4859

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,372,032	+		Pf1N1B4_4858	0.23	+1.5
5,372,036	+				+1.2
5,372,052	-		Pf1N1B4_4858	0.25	+0.3
5,372,335	+		Pf1N1B4_4858	0.48	-1.1
5,372,511	+		Pf1N1B4_4858	0.62	+0.6
5,372,511	+		Pf1N1B4_4858	0.62	+1.3
5,372,511	+		Pf1N1B4_4858	0.62	-1.2
5,372,511	+		Pf1N1B4_4858	0.62	+0.6
5,372,511	+		Pf1N1B4_4858	0.62	-0.4
5,372,511	+		Pf1N1B4_4858	0.62	-0.2
5,372,511	+		Pf1N1B4_4858	0.62	-1.0
5,372,511	+				-0.4
5,372,512	-				+2.0
5,372,691	+		Pf1N1B4_4858	0.77	+0.3
5,372,691	+		Pf1N1B4_4858	0.77	-0.6
5,372,692	-		Pf1N1B4_4858	0.77	+2.0
5,372,692	-				-1.2
5,372,699	+		Pf1N1B4_4858	0.78	+0.3
5,372,699	+		Pf1N1B4_4858	0.78	+0.6
5,372,699	+		Pf1N1B4_4858	0.78	-0.6
5,372,699	+		Pf1N1B4_4858	0.78	-1.2
5,372,699	+		Pf1N1B4_4858	0.78	+0.8
5,372,835	+		Pf1N1B4_4858	0.89	-0.2
5,372,839	+		Pf1N1B4_4858	0.89	-0.3
5,372,839	+		Pf1N1B4_4858	0.89	-2.3
5,372,839	+		Pf1N1B4_4858	0.89	+0.2
5,372,839	+		Pf1N1B4_4858	0.89	-1.7
5,372,980	+				+0.3
5,372,980	+				-1.6
5,372,980	+				-1.6
5,372,990	+				-0.4
5,372,990	+				-2.2
5,372,990	+				-1.5
5,372,990	+				+2.2
5,373,510	+				-0.9
5,373,510	+				-0.6
5,373,656	+				+2.6
5,373,656	+				+0.1
5,373,657	-				+0.8
5,373,657	-				+0.6
5,374,035	+		Pf1N1B4_4860	0.31	-0.4
5,374,035	+		Pf1N1B4_4860	0.31	-0.7
5,374,162	-		Pf1N1B4_4860	0.39	-0.3