Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4804

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,306,208	+				+0.1
5,306,209	-				+1.0
5,306,209	-				-1.6
5,306,209	-				+2.5
5,306,209	-				+0.8
5,306,209	-				+2.1
5,306,209	-				-1.4
5,306,263	+				+0.8
5,306,264	-				+0.6
5,306,264	-				+0.1
5,306,264	-				-0.3
5,306,264	-				-1.9
5,306,264	-				+0.2
5,306,264	-				-0.3
5,306,455	+		Pf1N1B4_4803	0.25	+0.5
5,306,456	-		Pf1N1B4_4803	0.25	+0.1
5,306,456	-		Pf1N1B4_4803	0.25	+0.1
5,306,456	-		Pf1N1B4_4803	0.25	-2.1
5,306,744	-		Pf1N1B4_4803	0.61	-0.4
5,307,061	-				+2.2
5,307,075	+				+0.2
5,307,076	-				-0.2
5,307,076	-				-0.4
5,307,076	-				+0.2
5,307,110	+				+1.2
5,307,111	-				-1.4
5,307,191	+				-1.4
5,307,191	+				-0.6
5,307,192	-				-1.5
5,307,192	-				-1.1
5,307,194	+				+0.3
5,307,194	+				+0.3
5,307,868	-				-0.1
5,307,868	-				-0.4
5,307,868	-				+0.7
5,307,868	-				+1.1
5,308,045	+		Pf1N1B4_4805	0.15	+0.3
5,308,048	+		Pf1N1B4_4805	0.15	-0.2
5,308,049	-				-1.4
5,308,049	-		Pf1N1B4_4805	0.15	+0.2
5,308,049	-				+0.8
5,308,066	+		Pf1N1B4_4805	0.17	+1.2
5,308,067	-		Pf1N1B4_4805	0.17	-1.6
5,308,280	-		Pf1N1B4_4805	0.42	-0.3
5,308,451	-		Pf1N1B4_4805	0.61	-0.7
5,308,451	-		Pf1N1B4_4805	0.61	-1.1
5,308,451	-		Pf1N1B4_4805	0.61	-0.0
5,308,577	+		Pf1N1B4_4805	0.75	+1.6
5,308,609	+		Pf1N1B4_4805	0.79	-0.5
5,308,696	+		Pf1N1B4_4805	0.89	-0.8
5,308,696	+		Pf1N1B4_4805	0.89	+0.1
5,308,697	-		Pf1N1B4_4805	0.89	+0.3
5,308,710	+				-1.0
5,308,711	-				+0.6
5,308,711	-				+0.5