Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4717

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,212,883	+				-0.0
5,213,105	+		Pf1N1B4_4716	0.35	-0.4
5,213,105	+		Pf1N1B4_4716	0.35	+0.7
5,213,207	+		Pf1N1B4_4716	0.44	-2.6
5,213,282	+		Pf1N1B4_4716	0.51	+1.9
5,213,283	-		Pf1N1B4_4716	0.51	-1.6
5,213,352	+		Pf1N1B4_4716	0.58	-1.2
5,213,432	+		Pf1N1B4_4716	0.65	-0.3
5,213,629	+				-0.4
5,213,708	+				+0.3
5,213,831	+				-1.9
5,213,831	+				+2.3
5,213,831	+				-1.0
5,213,832	-				+0.8
5,213,832	-				-0.0
5,213,832	-				+0.2
5,213,909	+				+0.7
5,213,909	+				-0.3
5,213,909	+				+0.3
5,213,910	-				-0.5
5,213,910	-				+1.0
5,214,545	+		Pf1N1B4_4717	0.74	-0.2
5,214,721	+				-1.6
5,214,721	+				+1.0
5,214,722	-				-0.3
5,214,767	+				-0.0
5,214,767	+				-0.9
5,214,768	-				-0.4
5,214,768	-				+0.4
5,214,867	-				+0.1
5,214,867	-				+0.4
5,214,967	-				+0.6
5,215,036	-				-0.2
5,215,036	-				+1.2
5,215,036	-				+0.9
5,215,179	-				+2.6
5,215,179	-		Pf1N1B4_4718	0.24	+0.7
5,215,179	-		Pf1N1B4_4718	0.24	-1.5