Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4652

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,130,192	-				+0.7
5,130,192	-				-0.6
5,130,257	-				-1.4
5,130,321	-				-0.8
5,130,406	-				+0.4
5,130,528	+				-0.4
5,130,530	+		Pf1N1B4_4651	0.25	+0.5
5,130,530	+		Pf1N1B4_4651	0.25	-0.3
5,130,531	-		Pf1N1B4_4651	0.25	+0.9
5,130,531	-		Pf1N1B4_4651	0.25	-1.5
5,130,531	-		Pf1N1B4_4651	0.25	+0.6
5,130,531	-				-0.2
5,130,607	+		Pf1N1B4_4651	0.35	+0.0
5,130,623	-		Pf1N1B4_4651	0.37	-0.8
5,130,689	-		Pf1N1B4_4651	0.45	+0.3
5,131,111	-				-1.2
5,131,222	+				+0.1
5,131,222	+				-0.3
5,131,222	+				+2.1
5,131,370	-		Pf1N1B4_4652	0.38	+1.1
5,132,003	-				-0.4
5,132,109	-				-1.7
5,132,282	+		Pf1N1B4_4654	0.16	-2.8
5,132,379	-		Pf1N1B4_4654	0.23	-1.7
5,132,454	-		Pf1N1B4_4654	0.28	-1.2
5,132,516	+		Pf1N1B4_4654	0.32	-0.2
5,132,569	-		Pf1N1B4_4654	0.36	-1.6