Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4537

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,003,667	+				+0.6
5,004,056	+		Pf1N1B4_4536	0.71	+0.4
5,004,226	+				+0.8
5,004,230	+				+0.3
5,004,230	+				-1.4
5,004,230	+				+1.6
5,004,231	-				-0.5
5,004,369	+				-0.2
5,004,589	-				+0.6
5,004,589	-		Pf1N1B4_4537	0.21	-1.2
5,004,639	+		Pf1N1B4_4537	0.25	-0.2
5,004,640	-		Pf1N1B4_4537	0.25	-1.0
5,004,812	-		Pf1N1B4_4537	0.36	-0.9
5,004,936	+				+1.6
5,004,937	-		Pf1N1B4_4537	0.45	-1.1
5,004,937	-		Pf1N1B4_4537	0.45	-0.1
5,004,973	-		Pf1N1B4_4537	0.47	-1.7
5,005,324	-		Pf1N1B4_4537	0.71	+1.0
5,005,641	+				-0.4
5,005,642	-				-0.5
5,005,720	+				+0.0
5,006,275	+		Pf1N1B4_4538	0.89	+0.4
5,006,403	-				-0.2
5,006,511	-				+1.9