Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4077

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
4,526,090	+		Pf1N1B4_4075	0.25	-1.2
4,526,189	+		Pf1N1B4_4075	0.53	-0.7
4,526,190	-		Pf1N1B4_4075	0.53	-0.7
4,526,190	-		Pf1N1B4_4075	0.53	-0.4
4,526,190	-		Pf1N1B4_4075	0.53	-0.3
4,526,225	+		Pf1N1B4_4075	0.63	+0.8
4,526,225	+		Pf1N1B4_4075	0.63	-1.4
4,526,225	+		Pf1N1B4_4075	0.63	+1.1
4,526,225	+		Pf1N1B4_4075	0.63	-0.4
4,526,225	+		Pf1N1B4_4075	0.63	-0.7
4,526,225	+		Pf1N1B4_4075	0.63	+2.0
4,526,225	+				+2.6
4,526,226	-		Pf1N1B4_4075	0.64	-0.1
4,526,251	-		Pf1N1B4_4075	0.71	-2.0
4,526,288	+		Pf1N1B4_4075	0.81	-1.4
4,526,288	+		Pf1N1B4_4075	0.81	+0.1
4,526,288	+		Pf1N1B4_4075	0.81	+0.7
4,526,288	+				+0.6
4,526,289	-		Pf1N1B4_4075	0.81	-1.6
4,526,291	+		Pf1N1B4_4075	0.82	+0.1
4,526,352	-				-0.5
4,526,352	-				-1.6
4,526,352	-				+0.7
4,526,352	-				-0.3
4,526,352	-				+1.4
4,526,352	-				+0.2
4,526,411	+				-0.6
4,526,411	+				-0.4
4,526,412	-				+1.6
4,526,412	-				+0.4
4,526,412	-				-0.3
4,526,412	-				+1.0
4,526,464	-				+0.7
4,526,464	-				-0.1
4,526,464	-				-2.1
4,526,469	-				-1.3
4,526,469	-				+1.0
4,526,536	+		Pf1N1B4_4076	0.16	-0.9
4,526,562	-		Pf1N1B4_4076	0.22	+0.6
4,526,718	-		Pf1N1B4_4076	0.59	-0.4
4,526,733	-		Pf1N1B4_4076	0.62	+0.0
4,526,818	-		Pf1N1B4_4076	0.82	+0.3
4,526,820	-				-1.6
4,526,820	-		Pf1N1B4_4076	0.82	+0.8
4,526,820	-		Pf1N1B4_4076	0.82	-0.7
4,526,820	-		Pf1N1B4_4076	0.82	+0.0
4,526,895	+				+0.5
4,526,896	-				+0.6
4,526,896	-				+0.9
4,526,900	+				-0.4
4,526,901	-				-0.2
4,526,901	-				+1.4
4,526,998	-				+0.3
4,527,145	+		Pf1N1B4_4077	0.23	-1.9
4,527,146	-		Pf1N1B4_4077	0.24	-0.4
4,527,202	+		Pf1N1B4_4077	0.36	-0.6
4,527,203	-				-0.2
4,527,241	-		Pf1N1B4_4077	0.45	-0.4
4,527,448	+				-0.5
4,527,460	+				-1.7
4,527,461	-				-0.7
4,527,461	-				-0.3
4,527,565	+				-0.3
4,527,566	-				-0.3
4,527,641	+		Pf1N1B4_4078	0.10	+0.5
4,527,641	+		Pf1N1B4_4078	0.10	+0.2
4,527,669	-		Pf1N1B4_4078	0.15	+0.6
4,527,713	+		Pf1N1B4_4078	0.22	+0.5
4,527,941	+		Pf1N1B4_4078	0.61	+0.3
4,527,942	-		Pf1N1B4_4078	0.61	-1.3
4,527,942	-		Pf1N1B4_4078	0.61	+0.1
4,527,942	-		Pf1N1B4_4078	0.61	+0.6
4,528,094	+				-0.4
4,528,094	+		Pf1N1B4_4078	0.86	-0.8
4,528,095	-		Pf1N1B4_4078	0.87	+0.7
4,528,139	+				+0.3
4,528,314	-				-0.5
4,528,314	-				+1.6
4,528,451	+				-1.7
4,528,451	+				+0.3
4,528,452	-				+1.0
4,528,452	-				+1.1