Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3518

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
3,924,995	-		Pf1N1B4_3516	0.74	-0.1
3,925,007	+		Pf1N1B4_3516	0.75	+1.7
3,925,169	+		Pf1N1B4_3516	0.82	-0.0
3,925,205	-		Pf1N1B4_3516	0.84	-0.2
3,925,267	+		Pf1N1B4_3516	0.87	+0.3
3,925,267	+		Pf1N1B4_3516	0.87	+0.7
3,925,267	+		Pf1N1B4_3516	0.87	+0.2
3,925,267	+		Pf1N1B4_3516	0.87	-0.5
3,925,267	+		Pf1N1B4_3516	0.87	-0.2
3,925,267	+		Pf1N1B4_3516	0.87	+0.2
3,925,268	-				+0.2
3,925,268	-		Pf1N1B4_3516	0.87	+0.6
3,925,268	-		Pf1N1B4_3516	0.87	+1.0
3,925,557	+				+0.9
3,925,557	+				+1.0
3,925,558	-				-0.4
3,925,558	-				-1.2
3,925,651	+				-0.0
3,925,663	+		Pf1N1B4_3517	0.25	+0.4
3,925,701	+		Pf1N1B4_3517	0.42	+0.3
3,925,701	+		Pf1N1B4_3517	0.42	-0.2
3,925,743	+		Pf1N1B4_3517	0.61	-0.0
3,926,606	+		Pf1N1B4_3518	0.82	-1.2
3,926,607	-		Pf1N1B4_3518	0.82	-1.8
3,926,638	+		Pf1N1B4_3518	0.86	-0.4
3,926,638	+		Pf1N1B4_3518	0.86	-1.9
3,926,639	-		Pf1N1B4_3518	0.86	-0.8
3,926,639	-		Pf1N1B4_3518	0.86	-1.4
3,926,639	-		Pf1N1B4_3518	0.86	-0.2
3,926,639	-		Pf1N1B4_3518	0.86	-1.8
3,926,639	-		Pf1N1B4_3518	0.86	-1.0
3,926,708	+				-0.0
3,926,745	+				+0.3
3,926,767	+				-1.9
3,926,767	+				+0.8
3,926,767	+				-0.3
3,926,767	+				-0.2
3,926,767	+				-0.0
3,926,767	+				+0.2
3,926,767	+				+2.0
3,926,767	+				-0.2
3,926,767	+				-2.4
3,926,768	-				+0.2
3,926,768	-				-0.2
3,926,771	+				-0.4
3,926,781	+				-1.1
3,926,781	+				+0.8
3,926,781	+				+0.8
3,926,781	+				+3.4
3,926,781	+				-0.8
3,926,782	-				-0.4
3,926,782	-				-0.6
3,926,782	-				+0.6
3,926,782	-				+0.6
3,926,828	+				+0.4
3,926,828	+				+0.2
3,926,828	+				+0.1
3,926,828	+				-1.9
3,926,867	+		Pf1N1B4_3519	0.19	-1.8
3,926,867	+		Pf1N1B4_3519	0.19	+0.1
3,926,867	+				-0.8
3,926,919	+		Pf1N1B4_3519	0.34	+1.1
3,926,919	+		Pf1N1B4_3519	0.34	+0.6
3,926,919	+		Pf1N1B4_3519	0.34	+1.6
3,926,919	+		Pf1N1B4_3519	0.34	-0.3
3,926,920	-		Pf1N1B4_3519	0.34	-0.4
3,926,931	-		Pf1N1B4_3519	0.37	+0.1
3,926,942	+		Pf1N1B4_3519	0.41	-0.9
3,927,144	+				-2.1
3,927,159	-				-1.0
3,927,286	+		Pf1N1B4_3520	0.31	+1.1
3,927,286	+		Pf1N1B4_3520	0.31	-0.4
3,927,286	+		Pf1N1B4_3520	0.31	-0.6
3,927,286	+		Pf1N1B4_3520	0.31	+0.6
3,927,286	+		Pf1N1B4_3520	0.31	-0.9
3,927,286	+		Pf1N1B4_3520	0.31	-0.8
3,927,287	-		Pf1N1B4_3520	0.31	+0.8
3,927,419	+		Pf1N1B4_3520	0.60	-1.6
3,927,478	+		Pf1N1B4_3520	0.74	-0.1
3,927,479	-		Pf1N1B4_3520	0.74	+0.4
3,927,479	-		Pf1N1B4_3520	0.74	+0.6
3,927,479	-		Pf1N1B4_3520	0.74	-0.3
3,927,639	+				-1.4
3,927,640	-				-0.1
3,927,727	-				-1.5