Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3435

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
3,827,620	+		Pf1N1B4_3434	0.48	-0.3
3,827,620	+		Pf1N1B4_3434	0.48	-1.1
3,827,620	+				+0.6
3,827,620	+		Pf1N1B4_3434	0.48	-0.8
3,827,620	+		Pf1N1B4_3434	0.48	-0.3
3,827,621	-		Pf1N1B4_3434	0.48	+0.7
3,827,621	-		Pf1N1B4_3434	0.48	+0.2
3,827,621	-		Pf1N1B4_3434	0.48	+1.3
3,827,621	-		Pf1N1B4_3434	0.48	+1.2
3,827,621	-		Pf1N1B4_3434	0.48	-0.6
3,827,621	-		Pf1N1B4_3434	0.48	+0.1
3,827,621	-		Pf1N1B4_3434	0.48	+0.8
3,827,621	-		Pf1N1B4_3434	0.48	-0.8
3,827,621	-		Pf1N1B4_3434	0.48	-0.6
3,827,621	-		Pf1N1B4_3434	0.48	+1.1
3,827,621	-		Pf1N1B4_3434	0.48	-0.2
3,827,621	-		Pf1N1B4_3434	0.48	-1.9
3,827,621	-		Pf1N1B4_3434	0.48	+1.0
3,827,852	-		Pf1N1B4_3434	0.69	+0.1
3,828,088	-		Pf1N1B4_3434	0.90	-0.4
3,828,232	+				-0.8
3,828,232	+				+0.9
3,828,232	+				+2.3
3,828,232	+				+0.5
3,828,232	+				-1.0
3,828,232	+				+0.1
3,828,232	+				+1.1
3,828,258	+				+1.1
3,828,258	+				-1.0
3,828,265	+				+1.6
3,828,266	-				-0.0
3,828,357	+		Pf1N1B4_3435	0.17	-1.4
3,828,357	+		Pf1N1B4_3435	0.17	+0.1
3,828,358	-		Pf1N1B4_3435	0.17	-0.0
3,828,415	-		Pf1N1B4_3435	0.24	-0.8
3,828,625	+		Pf1N1B4_3435	0.52	-0.4
3,828,625	+		Pf1N1B4_3435	0.52	-1.6
3,828,991	+				+0.6
3,828,991	+				+0.2
3,828,992	-				-1.3
3,828,992	-				+0.3
3,829,280	+		Pf1N1B4_3436	0.63	+2.4
3,829,281	-		Pf1N1B4_3436	0.63	-0.4
3,829,281	-		Pf1N1B4_3436	0.63	+0.2
3,829,350	+				-0.8
3,829,351	-				-1.3
3,829,532	-		Pf1N1B4_3437	0.24	-0.4
3,829,558	-		Pf1N1B4_3437	0.27	-0.0
3,829,945	+		Pf1N1B4_3437	0.70	+0.9
3,829,980	+		Pf1N1B4_3437	0.74	+0.1
3,829,980	+		Pf1N1B4_3437	0.74	+1.6
3,829,981	-		Pf1N1B4_3437	0.74	+1.6
3,829,981	-		Pf1N1B4_3437	0.74	+0.4
3,829,981	-		Pf1N1B4_3437	0.74	+2.6
3,829,981	-		Pf1N1B4_3437	0.74	-0.3
3,829,981	-		Pf1N1B4_3437	0.74	-1.2