Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3327

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
3,716,899	-				-1.9
3,716,899	-				+0.7
3,716,899	-				-1.3
3,716,930	+				+1.0
3,716,935	+				-0.8
3,716,981	+				-2.5
3,717,077	+		Pf1N1B4_3328	0.45	-1.9
3,717,147	+		Pf1N1B4_3328	0.75	-0.8
3,717,147	+		Pf1N1B4_3328	0.75	+0.2
3,717,147	+		Pf1N1B4_3328	0.75	-1.0
3,717,227	+				-1.2
3,717,227	+				-1.0
3,717,234	+				+0.3
3,717,234	+				-0.2
3,717,272	+				+2.9
3,717,325	+				+2.0
3,717,491	-		Pf1N1B4_3329	0.24	+1.7
3,717,731	+		Pf1N1B4_3329	0.46	-0.4
3,717,731	+				+1.2
3,717,732	-		Pf1N1B4_3329	0.46	-1.5
3,717,732	-		Pf1N1B4_3329	0.46	-1.6
3,717,806	+				+1.6