Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2822

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
3,165,218	+				-0.0
3,165,218	+				-0.8
3,165,487	-		Pf1N1B4_2822	0.24	+0.2
3,166,363	+				+2.2
3,166,763	+		Pf1N1B4_2823	0.79	-0.8
3,166,763	+		Pf1N1B4_2823	0.79	+0.6
3,166,763	+		Pf1N1B4_2823	0.79	+0.2
3,166,780	-		Pf1N1B4_2823	0.82	-1.6
3,166,812	-		Pf1N1B4_2823	0.86	+0.6
3,166,910	+				-0.2
3,166,910	+				+0.3
3,166,970	+				+0.6
3,166,970	+				-0.2
3,166,971	-				+0.6
3,166,971	-				-0.4
3,166,971	-				-2.3
3,166,971	-				+1.0
3,166,971	-				+0.2
3,166,971	-				+2.2
3,166,971	-				+0.8
3,166,971	-				+1.6
3,167,008	+				+0.2
3,167,008	+				+1.8
3,167,009	-				-0.6
3,167,010	+				+1.5
3,167,010	+				-1.4
3,167,010	+				-0.4
3,167,010	+				-1.6
3,167,010	+				+0.6
3,167,010	+				+0.2
3,167,010	+				+0.8
3,167,011	-				+0.4
3,167,011	-				+0.1
3,167,011	-				+0.4
3,167,011	-				+2.2
3,167,011	-				-0.4
3,167,011	-				+1.0
3,167,047	+				-0.1
3,167,047	+				+0.8
3,167,048	-				+0.4
3,167,048	-				-1.0
3,167,048	-				-0.4
3,167,049	+				-0.8
3,167,049	+				-1.2
3,167,049	+				-0.0
3,167,049	+				+0.6
3,167,050	-				-1.2
3,167,076	+				-1.1