Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2803

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
3,144,648	+		Pf1N1B4_2801	0.41	-0.0
3,144,660	+		Pf1N1B4_2801	0.43	+1.1
3,144,660	+		Pf1N1B4_2801	0.43	-1.6
3,144,661	-		Pf1N1B4_2801	0.44	-1.4
3,144,691	+		Pf1N1B4_2801	0.50	+0.2
3,144,691	+		Pf1N1B4_2801	0.50	+0.4
3,144,691	+		Pf1N1B4_2801	0.50	-0.8
3,144,691	+		Pf1N1B4_2801	0.50	-1.8
3,144,691	+		Pf1N1B4_2801	0.50	-1.6
3,144,691	+		Pf1N1B4_2801	0.50	+2.6
3,144,691	+		Pf1N1B4_2801	0.50	-0.8
3,144,691	+		Pf1N1B4_2801	0.50	-0.3
3,144,691	+		Pf1N1B4_2801	0.50	+1.2
3,144,691	+		Pf1N1B4_2801	0.50	-0.0
3,144,823	+		Pf1N1B4_2801	0.78	-0.4
3,144,823	+		Pf1N1B4_2801	0.78	-1.5
3,144,824	-		Pf1N1B4_2801	0.79	-0.6
3,144,833	+		Pf1N1B4_2801	0.81	+0.1
3,144,833	+		Pf1N1B4_2801	0.81	-0.4
3,144,833	+		Pf1N1B4_2801	0.81	+0.2
3,144,833	+		Pf1N1B4_2801	0.81	+0.6
3,144,834	-		Pf1N1B4_2801	0.81	-0.0
3,144,834	-		Pf1N1B4_2801	0.81	+0.7
3,144,842	+		Pf1N1B4_2801	0.83	-0.0
3,144,842	+		Pf1N1B4_2801	0.83	-1.1
3,144,842	+		Pf1N1B4_2801	0.83	+0.1
3,144,925	+				+0.9
3,144,925	+				-0.4
3,144,985	+				-0.0
3,144,985	+				-0.8
3,144,985	+				-0.6
3,144,985	+				-1.0
3,144,985	+				-1.0
3,144,985	+				-0.8
3,144,985	+				-0.2
3,144,985	+				-1.1
3,144,985	+				-2.7
3,144,985	+				+0.2
3,144,985	+				-0.3
3,144,985	+				-1.2
3,144,985	+				-1.2
3,144,985	+				-0.6
3,144,985	+				+0.7
3,144,985	+				-3.2
3,144,985	+				-2.4
3,144,985	+				-0.3
3,144,985	+				-0.7
3,144,985	+				+0.2
3,144,985	+				-0.6
3,144,985	+				+1.0
3,144,986	-				-0.0
3,144,986	-				+0.8
3,144,986	-				-0.5
3,145,015	-				-0.8
3,145,500	-				+0.4
3,147,274	+				+1.9
3,147,287	+				+1.1
3,147,287	+				+0.6