Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2796

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
3,138,997	-				-0.3
3,138,997	-				-0.3
3,138,997	-				-1.3
3,139,045	+		Pf1N1B4_2794	0.20	-0.4
3,139,046	-		Pf1N1B4_2794	0.21	+1.6
3,139,105	-		Pf1N1B4_2794	0.43	+0.5
3,139,164	+		Pf1N1B4_2794	0.66	-0.8
3,139,165	-		Pf1N1B4_2794	0.67	+1.6
3,139,207	+		Pf1N1B4_2794	0.83	-1.0
3,139,207	+		Pf1N1B4_2794	0.83	-0.9
3,139,208	-		Pf1N1B4_2794	0.83	+1.9
3,139,243	+				-1.8
3,139,243	+				-1.8
3,139,243	+				+1.6
3,139,243	+				-0.2
3,139,243	+				+0.6
3,139,244	-				+2.0
3,139,244	-				+0.2
3,139,244	-				-0.7
3,139,244	-				+0.6
3,139,244	-				+0.7
3,139,244	-				+0.1
3,139,244	-				-1.5
3,139,244	-				+0.4
3,139,314	+				+0.8
3,139,751	+		Pf1N1B4_2795	0.86	-0.9
3,139,751	+		Pf1N1B4_2795	0.86	+0.1
3,139,752	-		Pf1N1B4_2795	0.87	-1.3
3,139,752	-		Pf1N1B4_2795	0.87	-0.2
3,139,752	-		Pf1N1B4_2795	0.87	-0.3
3,139,752	-		Pf1N1B4_2795	0.87	+0.3
3,139,752	-		Pf1N1B4_2795	0.87	-1.3
3,139,752	-		Pf1N1B4_2795	0.87	+0.4
3,139,752	-		Pf1N1B4_2795	0.87	-1.3
3,139,752	-		Pf1N1B4_2795	0.87	-1.1
3,139,757	+		Pf1N1B4_2795	0.88	-0.8
3,139,757	+		Pf1N1B4_2795	0.88	-1.4
3,139,757	+		Pf1N1B4_2795	0.88	+2.6
3,139,758	-		Pf1N1B4_2795	0.88	-0.0
3,139,758	-		Pf1N1B4_2795	0.88	-0.9
3,139,799	-				+0.2
3,139,839	+				-0.4
3,139,839	+				-0.3
3,139,839	+				+0.2
3,139,839	+				-0.6
3,139,839	+				-1.4
3,139,839	+				+0.1
3,139,839	+				+1.0
3,139,839	+				-0.8
3,139,840	-				-1.7
3,139,840	-				-0.0
3,139,840	-				-3.0
3,139,840	-				+0.1
3,139,840	-				+1.2
3,139,841	+				-1.4
3,139,920	+				-0.1
3,139,921	-				-1.1
3,139,921	-				-0.3
3,139,954	-				+0.9
3,139,954	-				+0.8