Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2558

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
2,899,587	-		Pf1N1B4_2557	0.27	-1.1
2,899,607	-		Pf1N1B4_2557	0.29	-1.0
2,899,648	+		Pf1N1B4_2557	0.34	+0.8
2,899,649	-		Pf1N1B4_2557	0.34	-0.3
2,899,649	-		Pf1N1B4_2557	0.34	-0.8
2,899,650	+		Pf1N1B4_2557	0.34	-0.4
2,899,650	+		Pf1N1B4_2557	0.34	-0.9
2,899,650	+		Pf1N1B4_2557	0.34	+1.2
2,899,650	+		Pf1N1B4_2557	0.34	+0.1
2,899,651	-		Pf1N1B4_2557	0.34	-1.0
2,899,651	-		Pf1N1B4_2557	0.34	-1.0
2,899,941	+		Pf1N1B4_2557	0.64	+0.2
2,899,941	+		Pf1N1B4_2557	0.64	-0.0
2,899,941	+		Pf1N1B4_2557	0.64	+0.6
2,900,000	+		Pf1N1B4_2557	0.70	+0.7
2,900,076	+		Pf1N1B4_2557	0.78	-0.0
2,900,076	+				+0.6
2,900,180	+		Pf1N1B4_2557	0.89	-0.4
2,900,224	+				-1.6
2,900,225	-				-0.7
2,900,243	+				+0.1
2,900,244	-				+1.1
2,900,244	-				-0.3
2,900,325	+				-0.4
2,900,325	+				-0.4
2,900,326	-				-0.3
2,900,760	-				-1.8
2,900,760	-				+0.3
2,900,760	-				-0.0
2,900,789	+				-0.4
2,900,789	+				-0.0
2,900,789	+				+0.6
2,900,789	+				-0.8
2,900,789	+				-0.4
2,900,789	+				+0.3
2,900,789	+				-0.4
2,900,789	+				+0.8
2,900,789	+				-1.4
2,900,789	+				-1.6
2,900,789	+				-2.3
2,900,789	+				+1.6
2,900,789	+				+1.1
2,900,789	+				+0.9
2,900,789	+				-1.6
2,900,789	+				-0.4
2,900,790	-				-2.3
2,900,790	-				-0.0
2,900,790	-				-2.3
2,900,790	-				-0.8
2,900,790	-				-0.3
2,900,792	+				-0.0
2,900,792	+				+1.6
2,900,849	+				-2.8
2,900,849	+				+0.8
2,900,890	+				+1.6
2,900,890	+				+1.6