Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2351

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
2,664,554	-		Pf1N1B4_2350	0.13	+1.0
2,664,554	-		Pf1N1B4_2350	0.13	-1.6
2,664,963	-		Pf1N1B4_2350	0.84	-0.6
2,664,963	-		Pf1N1B4_2350	0.84	-1.6
2,664,963	-		Pf1N1B4_2350	0.84	+2.7
2,664,963	-		Pf1N1B4_2350	0.84	-0.6
2,664,963	-		Pf1N1B4_2350	0.84	-0.0
2,664,963	-		Pf1N1B4_2350	0.84	+0.6
2,664,963	-		Pf1N1B4_2350	0.84	-0.4
2,664,963	-		Pf1N1B4_2350	0.84	-1.3
2,665,061	-				-0.9
2,665,172	+				+0.6
2,665,172	+				-0.0
2,665,172	+				-1.7
2,665,173	-				+0.2
2,665,173	-				-0.2
2,665,249	+				-0.2
2,665,249	+				+2.6
2,665,250	-				-1.6
2,665,250	-				+2.9
2,666,159	+				-1.2
2,666,160	-				-1.5
2,666,160	-				+0.4
2,666,160	-				+0.4
2,666,214	+				-0.6
2,666,215	-				-0.7
2,666,215	-				+0.6
2,666,215	-				+1.5
2,666,215	-				-0.1
2,666,215	-				-0.5
2,666,237	+				+0.4
2,666,238	-				+1.2
2,666,238	-				-1.8
2,666,292	+				-0.7
2,666,293	-				-0.7
2,666,397	+		Pf1N1B4_2352	0.15	+2.2
2,666,397	+		Pf1N1B4_2352	0.15	-0.0
2,666,398	-		Pf1N1B4_2352	0.15	-1.0
2,666,621	-		Pf1N1B4_2352	0.38	+1.6
2,666,920	+		Pf1N1B4_2352	0.69	+1.6
2,666,920	+		Pf1N1B4_2352	0.69	-1.2
2,666,920	+		Pf1N1B4_2352	0.69	-1.0
2,666,921	-		Pf1N1B4_2352	0.69	-0.7
2,666,921	-		Pf1N1B4_2352	0.69	-0.0
2,666,921	-		Pf1N1B4_2352	0.69	+0.6
2,666,921	-		Pf1N1B4_2352	0.69	+0.6
2,666,929	+		Pf1N1B4_2352	0.70	+1.6
2,666,930	-		Pf1N1B4_2352	0.70	-0.0
2,667,088	+		Pf1N1B4_2352	0.86	+1.0
2,667,089	-		Pf1N1B4_2352	0.86	-0.4