Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4636

Experiment: Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.05 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.05 vol%
6,071,022	+		BT4635	0.24	-0.4
6,071,022	+		BT4635	0.24	+1.4
6,071,023	-		BT4635	0.25	+0.0
6,071,232	-		BT4635	0.42	+1.0
6,071,236	-		BT4635	0.42	+0.0
6,071,236	-		BT4635	0.42	-0.7
6,071,300	+		BT4635	0.47	-2.5
6,071,300	+		BT4635	0.47	+1.6
6,071,306	+		BT4635	0.48	-0.5
6,071,306	+		BT4635	0.48	+0.6
6,071,307	-		BT4635	0.48	+1.6
6,071,325	-		BT4635	0.49	-1.5
6,071,367	-		BT4635	0.53	-2.3
6,071,440	+		BT4635	0.59	-0.5
6,071,441	-		BT4635	0.59	+0.8
6,071,468	+		BT4635	0.61	-0.9
6,071,468	+		BT4635	0.61	-0.3
6,071,468	+		BT4635	0.61	+1.0
6,071,473	-		BT4635	0.62	-1.0
6,071,513	+		BT4635	0.65	+0.0
6,071,570	+		BT4635	0.70	+0.0
6,071,571	-		BT4635	0.70	-1.8
6,071,611	-		BT4635	0.73	+0.8
6,071,612	+		BT4635	0.73	+1.0
6,071,612	+		BT4635	0.73	+0.0
6,071,612	+		BT4635	0.73	-0.8
6,071,613	-		BT4635	0.73	-1.5
6,071,634	+		BT4635	0.75	+2.0
6,071,635	-		BT4635	0.75	-1.0
6,071,635	-		BT4635	0.75	-1.0
6,071,638	-		BT4635	0.75	+0.6
6,071,763	-		BT4635	0.85	+2.6
6,071,895	+				-0.7
6,071,896	-				-0.5
6,071,918	+				-0.6
6,071,919	-				+0.0
6,071,920	+				-2.3
6,071,920	+				-1.4
6,071,954	+				-1.5
6,071,954	+				-1.5
6,071,960	-				+0.0
6,072,029	-				-1.3
6,072,052	+				-1.0
6,072,077	+				-0.5
6,072,089	-		BT4636	0.11	-1.3
6,072,117	+		BT4636	0.16	+0.0
6,072,156	+		BT4636	0.23	-2.0
6,072,156	+		BT4636	0.23	-1.0
6,072,164	+		BT4636	0.24	-2.8
6,072,237	+		BT4636	0.36	-1.4
6,072,240	+		BT4636	0.37	-1.4
6,072,329	+		BT4636	0.52	-2.2
6,072,365	+		BT4636	0.58	+0.0
6,072,438	+		BT4636	0.70	+0.0
6,072,440	+		BT4636	0.70	+0.6
6,072,441	-		BT4636	0.71	+0.8
6,072,509	+		BT4636	0.82	+1.0
6,072,530	+		BT4636	0.86	-3.0
6,072,530	+		BT4636	0.86	-1.8
6,072,531	-		BT4636	0.86	-2.3
6,072,540	-		BT4636	0.87	-3.4
6,072,551	+		BT4636	0.89	-1.0
6,072,551	+		BT4636	0.89	-2.0
6,072,552	-		BT4636	0.89	+0.0
6,072,552	-		BT4636	0.89	-1.5
6,072,591	+				+0.2
6,072,616	-				-1.0
6,072,621	+				-1.3
6,072,729	-				-1.0
6,072,750	-				-1.3
6,072,761	+				-2.0
6,072,781	-				+1.0
6,072,801	+				-0.9
6,072,802	-				+0.0
6,072,868	+				+1.0
6,072,888	+				-1.8
6,072,899	+				-0.5
6,072,933	-				-0.5
6,072,960	-				+0.0
6,073,029	-		BT4637	0.16	-1.5
6,073,029	-		BT4637	0.16	-0.9
6,073,029	-		BT4637	0.16	-0.7
6,073,040	+		BT4637	0.17	+0.6
6,073,041	-		BT4637	0.17	-0.6
6,073,069	+		BT4637	0.20	-0.6
6,073,103	+		BT4637	0.23	-0.5
6,073,103	+		BT4637	0.23	-1.0
6,073,103	+		BT4637	0.23	+0.8
6,073,125	-		BT4637	0.25	+0.1
6,073,239	+		BT4637	0.36	+1.0
6,073,240	-		BT4637	0.37	-1.2
6,073,272	+		BT4637	0.40	-1.0
6,073,398	-		BT4637	0.52	+0.0
6,073,409	+		BT4637	0.53	-1.4
6,073,410	-		BT4637	0.53	+0.0
6,073,411	+		BT4637	0.53	+0.5
6,073,442	+		BT4637	0.56	+2.0
6,073,509	-		BT4637	0.63	-2.3
6,073,555	-		BT4637	0.67	-1.7
6,073,557	-		BT4637	0.68	-1.0