Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4650

Experiment: Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM
6,082,212	+				-1.9
6,082,574	-		BT4649	0.68	-1.0
6,082,620	+		BT4649	0.76	+0.0
6,082,758	-				-1.5
6,082,773	+				-2.5
6,082,777	-				-1.5
6,082,824	-				-1.6
6,082,831	+				+0.0
6,082,832	-				-1.3
6,082,833	+				+0.0
6,082,837	+				+0.8
6,082,935	+				-0.4
6,082,935	+				-1.5
6,082,935	+				+1.6
6,082,936	-				+0.6
6,082,963	-				-1.1
6,083,195	+				-1.3
6,083,196	-				-0.1
6,083,196	-				-1.0
6,083,209	-				+1.0
6,083,274	+		BT4650	0.13	-4.3
6,083,315	+		BT4650	0.15	-1.1
6,083,315	+		BT4650	0.15	-1.0
6,083,316	-		BT4650	0.15	-1.0
6,083,318	-		BT4650	0.15	-2.8
6,083,318	-		BT4650	0.15	+0.6
6,083,318	-		BT4650	0.15	-1.0
6,083,409	-		BT4650	0.21	-2.0
6,083,453	-		BT4650	0.24	+0.0
6,083,519	-		BT4650	0.28	+1.0
6,083,652	-		BT4650	0.37	-2.0
6,083,685	-				+0.0
6,083,881	-		BT4650	0.51	-1.3
6,083,909	-		BT4650	0.53	-2.1
6,083,919	+		BT4650	0.54	-0.4
6,083,919	+		BT4650	0.54	+0.8
6,083,919	+		BT4650	0.54	-0.4
6,083,920	-		BT4650	0.54	+0.8
6,083,931	-		BT4650	0.54	+0.0
6,084,143	-		BT4650	0.68	+0.6
6,084,188	+		BT4650	0.71	-0.5
6,084,198	-		BT4650	0.71	+0.0
6,084,198	-		BT4650	0.71	+0.2
6,084,198	-		BT4650	0.71	+0.5
6,084,198	-		BT4650	0.71	-1.3
6,084,212	+		BT4650	0.72	+0.5
6,084,213	-		BT4650	0.72	+0.8
6,084,243	-		BT4650	0.74	-1.0
6,084,243	-		BT4650	0.74	+0.0
6,084,309	-		BT4650	0.78	+0.0
6,084,333	+		BT4650	0.80	-1.0
6,084,355	+		BT4650	0.81	-0.5
6,084,355	+		BT4650	0.81	-1.8
6,084,376	+		BT4650	0.83	+2.4
6,084,387	-		BT4650	0.83	+1.0
6,084,423	+		BT4650	0.86	-0.1
6,084,424	-		BT4650	0.86	+0.2
6,084,437	-		BT4650	0.86	-1.3
6,084,503	+				-1.3
6,084,506	+				+0.5
6,084,512	+				-1.0
6,084,513	-				+0.0
6,084,632	+				-0.7
6,084,641	+				+0.4
6,084,656	-				-2.3
6,084,931	+		BT4651	0.32	-2.0
6,084,932	-		BT4651	0.32	-1.3
6,084,948	+		BT4651	0.34	-0.8
6,084,950	+		BT4651	0.34	-1.1
6,084,950	+		BT4651	0.34	-1.1
6,084,951	-		BT4651	0.34	-1.5
6,084,951	-		BT4651	0.34	-0.5
6,084,955	-		BT4651	0.35	+0.6
6,084,976	-		BT4651	0.37	+0.0
6,085,011	+		BT4651	0.41	-0.4
6,085,011	+		BT4651	0.41	+1.6
6,085,018	+		BT4651	0.42	-3.0
6,085,018	+		BT4651	0.42	-0.6
6,085,019	-		BT4651	0.42	-1.4
6,085,090	-		BT4651	0.51	+0.6
6,085,090	-		BT4651	0.51	-1.1
6,085,281	+		BT4651	0.74	-0.4
6,085,282	-		BT4651	0.74	-2.9
6,085,305	+		BT4651	0.76	-0.4
6,085,329	+		BT4651	0.79	-2.3
6,085,478	-				-1.0
6,085,478	-				+1.0
6,085,521	+				-1.5
6,085,534	-				-0.2
6,085,540	+				-0.3
6,085,540	+				-2.5
6,085,541	-				-0.4
6,085,567	+				-1.2
6,085,622	+				-1.4
6,085,638	+				+0.0
6,085,649	+				-0.5