Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25905

Experiment: malate (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS
5,787,031	-				-1.2
5,787,031	-				+0.3
5,787,031	-				+1.8
5,787,040	-				+0.4
5,787,047	-				+1.3
5,787,047	-				-0.7
5,787,047	-				-0.6
5,787,047	-				-0.3
5,787,060	-				-0.2
5,787,060	-				-1.5
5,787,060	-				-0.2
5,787,060	-				+0.8
5,787,060	-				-1.2
5,787,060	-				-1.7
5,787,062	-				+0.5
5,787,062	-				-0.1
5,787,062	-				+0.9
5,787,062	-				+0.3
5,787,062	-				+0.7
5,787,062	-				-1.9
5,787,062	-				-0.5
5,787,062	-				-0.9
5,787,075	-				+0.2
5,787,082	-				+0.7
5,787,102	+				-0.8
5,787,102	+				-0.9
5,787,102	+				-2.1
5,787,103	-				+0.1
5,787,103	-				+0.9
5,787,103	-				-0.6
5,787,103	-				+0.2
5,787,103	-				-1.4
5,787,103	-				+0.9
5,787,103	-				+0.0
5,787,103	-				-0.3
5,787,103	-				-0.8
5,787,103	-				-0.4
5,787,103	-				-1.2
5,787,103	-				-0.1
5,787,103	-				-1.5
5,787,698	+				-1.3
5,787,699	-				+0.5
5,787,701	-				+0.6
5,787,701	-				-0.4
5,787,701	-				+0.6
5,787,701	-				+0.1
5,787,701	-				+0.6
5,787,701	-				-1.1
5,787,701	-				+0.5
5,787,701	-				-0.3
5,787,754	+				+0.4
5,787,754	+				-0.6
5,787,754	+				+0.5
5,787,755	-				+0.9
5,787,777	+				+0.4
5,787,778	-				-1.8
5,787,778	-				-0.7
5,787,778	-				+0.9
5,787,778	-				+0.6
5,787,778	-				+0.9
5,787,779	+				-0.5
5,787,779	+				-0.3
5,787,779	+				-0.9
5,787,779	+				+0.3
5,787,779	+				+0.6
5,787,779	+				+1.7
5,787,779	+				-0.7
5,787,779	+				-1.7
5,787,779	+				-0.4
5,787,779	+				+0.2
5,787,779	+				+1.3
5,787,779	+				-0.2
5,787,779	+				-0.2
5,787,779	+				-1.4
5,787,779	+				+1.3
5,787,779	+				+0.0
5,787,779	+				+0.2
5,787,780	-				+0.3
5,787,780	-				+1.2
5,787,780	-				-1.7
5,787,780	-				-0.7
5,787,780	-				+1.5
5,787,780	-				+0.8
5,787,780	-				-0.4
5,787,780	-				+0.2
5,787,780	-				-1.6
5,787,780	-				+0.6
5,787,780	-				-0.0
5,787,780	-				-0.0
5,787,780	-				-0.5
5,787,828	-				-1.2
5,787,828	-				+0.3
5,787,828	-				-0.4
5,787,828	-				+0.4
5,787,865	+				+1.8
5,787,866	-				-1.7
5,787,866	-				+0.6
5,787,866	-				-0.9
5,787,919	+				+1.4
5,787,919	+				-0.4
5,787,920	-				+0.6
5,787,920	-				+0.3
5,787,920	-				+1.2
5,787,920	-				-1.5
5,787,923	+				+0.1
5,787,923	+				-0.0
5,787,923	+				-1.1
5,787,923	+				-3.7
5,787,923	+				-1.2
5,787,923	+				-1.1
5,787,923	+				-1.5
5,787,923	+				-0.6
5,787,923	+				+1.0
5,787,923	+				+0.8
5,787,923	+				+0.7
5,787,923	+				+0.6
5,787,923	+				+0.6
5,787,923	+				-0.6
5,787,923	+				-0.1
5,787,923	+				-0.1
5,787,923	+				-0.6
5,787,923	+				-0.5
5,787,923	+				+1.2
5,787,923	+				-0.6
5,787,923	+				+0.4
5,787,923	+				+0.9
5,787,923	+				-0.5
5,787,923	+				-0.9
5,787,923	+				-0.7
5,787,923	+				+0.3
5,787,923	+				+0.2
5,787,923	+				+1.1
5,787,923	+				+1.2
5,787,923	+				+0.8
5,787,923	+				-1.0
5,787,924	-				-2.4
5,787,924	-				+0.6
5,787,924	-				-1.1
5,787,924	-				-0.4
5,787,924	-				+0.7
5,787,924	-				-0.3
5,787,924	-				-0.3
5,787,924	-				+0.1
5,787,924	-				-0.1
5,787,924	-				-1.4
5,787,924	-				-1.3
5,787,924	-				+0.3
5,787,924	-				+0.0
5,787,924	-				-0.5
5,787,924	-				-1.1
5,787,924	-				+0.4
5,787,924	-				-0.6
5,787,924	-				+0.5
5,787,924	-				+0.1
5,787,924	-				+0.3
5,787,924	-				-0.7
5,787,924	-				+0.4
5,787,924	-				-1.7
5,787,924	-				-2.6
5,787,924	-				+0.1
5,787,924	-				+0.7
5,787,924	-				-0.1
5,787,924	-				-1.3
5,787,924	-				-1.5
5,787,924	-				+0.9
5,787,924	-				-0.9
5,787,927	+				+0.3
5,787,927	+				-0.0
5,787,927	+				+0.1
5,787,927	+				-1.7
5,787,927	+				-0.1
5,787,927	+				-0.7
5,787,927	+				-0.2
5,787,927	+				+0.0
5,787,927	+				+1.8
5,787,927	+				-0.2
5,787,927	+				-0.1
5,787,928	-				-0.3
5,787,928	-				+0.1
5,787,928	-				+1.1
5,787,928	-				-0.3
5,787,928	-				-0.1
5,787,928	-				+0.5
5,787,928	-				-1.2
5,787,928	-				-0.9
5,787,928	-				+0.4
5,787,928	-				-0.9
5,787,928	-				-0.0
5,787,928	-				+0.9
5,787,928	-				+0.9
5,787,976	+				-0.1
5,787,976	+				+0.5
5,787,976	+				+0.3
5,787,977	-				-1.8
5,787,977	-				+0.9
5,788,154	+		PFLU_RS25910	0.15	-0.5
5,788,155	-		PFLU_RS25910	0.15	+0.6
5,788,155	-		PFLU_RS25910	0.15	-0.5
5,788,155	-		PFLU_RS25910	0.15	-0.5
5,788,155	-		PFLU_RS25910	0.15	+0.3
5,788,155	-		PFLU_RS25910	0.15	-0.7
5,788,155	-		PFLU_RS25910	0.15	+0.8
5,788,155	-		PFLU_RS25910	0.15	-0.3
5,788,155	-		PFLU_RS25910	0.15	+1.3
5,788,155	-		PFLU_RS25910	0.15	+1.9
5,788,157	+		PFLU_RS25910	0.15	+0.3
5,788,157	+		PFLU_RS25910	0.15	+0.1
5,788,157	+		PFLU_RS25910	0.15	-1.0
5,788,157	+		PFLU_RS25910	0.15	-0.4
5,788,157	+		PFLU_RS25910	0.15	+0.3
5,788,157	+		PFLU_RS25910	0.15	+2.2
5,788,158	-		PFLU_RS25910	0.15	+1.3
5,788,158	-		PFLU_RS25910	0.15	+0.4
5,788,158	-		PFLU_RS25910	0.15	+0.9
5,788,158	-		PFLU_RS25910	0.15	+1.1
5,788,158	-		PFLU_RS25910	0.15	-0.6
5,788,158	-		PFLU_RS25910	0.15	-0.3
5,788,190	+		PFLU_RS25910	0.17	+0.7
5,788,190	+		PFLU_RS25910	0.17	-0.8
5,788,190	+		PFLU_RS25910	0.17	+0.6
5,788,191	-		PFLU_RS25910	0.17	+1.0
5,788,215	+		PFLU_RS25910	0.19	-0.8
5,788,215	+		PFLU_RS25910	0.19	+0.8
5,788,215	+		PFLU_RS25910	0.19	+0.1
5,788,215	+		PFLU_RS25910	0.19	+0.5
5,788,215	+		PFLU_RS25910	0.19	+0.9
5,788,216	-		PFLU_RS25910	0.19	+0.3
5,788,216	-		PFLU_RS25910	0.19	+0.9
5,788,216	-		PFLU_RS25910	0.19	+0.1
5,788,216	-		PFLU_RS25910	0.19	+1.1
5,788,216	-		PFLU_RS25910	0.19	+0.2
5,788,216	-		PFLU_RS25910	0.19	+0.9
5,788,216	-		PFLU_RS25910	0.19	-1.3
5,788,216	-		PFLU_RS25910	0.19	-0.4
5,788,217	+		PFLU_RS25910	0.19	+0.1
5,788,217	+		PFLU_RS25910	0.19	+0.5
5,788,217	+		PFLU_RS25910	0.19	+0.9
5,788,217	+		PFLU_RS25910	0.19	-0.4
5,788,217	+		PFLU_RS25910	0.19	+0.4
5,788,218	-		PFLU_RS25910	0.19	-0.9
5,788,218	-		PFLU_RS25910	0.19	+1.5
5,788,218	-		PFLU_RS25910	0.19	+0.2
5,788,218	-		PFLU_RS25910	0.19	+0.3
5,788,218	-		PFLU_RS25910	0.19	-0.9
5,788,218	-		PFLU_RS25910	0.19	-0.5
5,788,218	-		PFLU_RS25910	0.19	-0.7
5,788,344	+		PFLU_RS25910	0.27	+0.6
5,788,344	+		PFLU_RS25910	0.27	-0.6
5,788,465	+		PFLU_RS25910	0.34	-1.4
5,788,465	+		PFLU_RS25910	0.34	-1.2
5,788,466	-		PFLU_RS25910	0.34	+0.3
5,788,466	-		PFLU_RS25910	0.34	+0.6
5,788,466	-		PFLU_RS25910	0.34	-0.7
5,788,466	-		PFLU_RS25910	0.34	+0.8
5,788,473	+		PFLU_RS25910	0.34	+0.8
5,788,473	+		PFLU_RS25910	0.34	-0.0
5,788,473	+		PFLU_RS25910	0.34	+1.3
5,788,473	+		PFLU_RS25910	0.34	-0.4
5,788,473	+		PFLU_RS25910	0.34	+0.6
5,788,473	+		PFLU_RS25910	0.34	+1.0
5,788,474	-		PFLU_RS25910	0.34	+0.3
5,788,474	-		PFLU_RS25910	0.34	+0.4
5,788,624	+		PFLU_RS25910	0.43	+0.6
5,788,624	+		PFLU_RS25910	0.43	+0.1
5,788,624	+		PFLU_RS25910	0.43	-0.2
5,788,624	+		PFLU_RS25910	0.43	-0.3
5,788,624	+		PFLU_RS25910	0.43	+0.6
5,788,624	+		PFLU_RS25910	0.43	-0.1
5,788,624	+		PFLU_RS25910	0.43	+1.5
5,788,624	+		PFLU_RS25910	0.43	+0.5
5,788,624	+		PFLU_RS25910	0.43	-1.0
5,788,625	-		PFLU_RS25910	0.43	+0.5
5,788,625	-		PFLU_RS25910	0.43	+1.5
5,788,625	-		PFLU_RS25910	0.43	-0.3
5,788,625	-		PFLU_RS25910	0.43	-0.4
5,788,625	-		PFLU_RS25910	0.43	-1.3
5,788,625	-		PFLU_RS25910	0.43	+1.3
5,788,625	-		PFLU_RS25910	0.43	-0.2
5,788,625	-		PFLU_RS25910	0.43	+1.1
5,788,625	-		PFLU_RS25910	0.43	-1.1
5,788,625	-		PFLU_RS25910	0.43	+0.6
5,788,625	-		PFLU_RS25910	0.43	+0.1