Experiment: malate (C) and Ammonium chloride (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS25885 and PFLU_RS25890 are separated by 259 nucleotides PFLU_RS25890 and PFLU_RS25895 are separated by 10 nucleotides
PFLU_RS25885: PFLU_RS25885 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 5,781,412 to 5,782,548
_RS25885
PFLU_RS25890: PFLU_RS25890 - 4-hydroxy-tetrahydrodipicolinate reductase, at 5,782,808 to 5,783,614
_RS25890
PFLU_RS25895: PFLU_RS25895 - molecular chaperone DnaJ, at 5,783,625 to 5,784,749
_RS25895
Position (kb)
5782
5783
5784 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5782.562 kb on - strand at 5782.562 kb on - strand at 5782.562 kb on - strand at 5782.566 kb on - strand at 5782.566 kb on - strand at 5782.566 kb on - strand at 5782.566 kb on - strand at 5782.566 kb on - strand at 5782.566 kb on - strand at 5782.566 kb on - strand at 5782.594 kb on - strand at 5782.612 kb on - strand at 5782.612 kb on - strand at 5782.671 kb on - strand at 5782.671 kb on - strand at 5782.679 kb on - strand at 5782.679 kb on - strand at 5782.679 kb on - strand at 5782.723 kb on - strand at 5782.760 kb on + strand at 5782.773 kb on + strand at 5782.773 kb on + strand at 5782.773 kb on + strand at 5782.773 kb on + strand at 5782.773 kb on + strand at 5782.773 kb on + strand at 5782.773 kb on + strand at 5782.773 kb on + strand at 5782.773 kb on + strand at 5782.774 kb on - strand at 5782.774 kb on - strand at 5782.774 kb on - strand at 5782.774 kb on - strand at 5782.774 kb on - strand at 5782.779 kb on + strand at 5782.779 kb on + strand at 5782.779 kb on + strand at 5782.779 kb on + strand at 5782.779 kb on + strand at 5782.779 kb on + strand at 5782.780 kb on - strand at 5782.780 kb on - strand at 5782.780 kb on - strand at 5782.780 kb on - strand at 5782.780 kb on - strand at 5782.780 kb on - strand at 5782.798 kb on + strand at 5782.798 kb on + strand at 5782.798 kb on + strand at 5782.802 kb on + strand at 5782.803 kb on - strand at 5782.809 kb on + strand at 5782.810 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction malate (C) and Ammonium chloride (N); with MOPS remove 5,782,562 - -0.8 5,782,562 - -0.3 5,782,562 - -0.1 5,782,566 - +2.5 5,782,566 - -0.1 5,782,566 - -0.1 5,782,566 - +0.7 5,782,566 - -1.1 5,782,566 - +1.5 5,782,566 - -0.2 5,782,594 - -1.6 5,782,612 - -1.1 5,782,612 - -0.7 5,782,671 - -0.3 5,782,671 - -0.0 5,782,679 - +0.3 5,782,679 - +0.1 5,782,679 - +0.9 5,782,723 - -0.1 5,782,760 + -2.3 5,782,773 + +0.3 5,782,773 + -0.7 5,782,773 + +0.9 5,782,773 + +0.6 5,782,773 + -0.1 5,782,773 + +0.3 5,782,773 + -0.2 5,782,773 + +0.7 5,782,773 + -0.4 5,782,774 - +0.1 5,782,774 - -0.3 5,782,774 - -0.5 5,782,774 - -1.4 5,782,774 - +0.8 5,782,779 + -1.1 5,782,779 + +0.7 5,782,779 + -0.2 5,782,779 + +0.8 5,782,779 + +1.0 5,782,779 + -0.1 5,782,780 - -0.8 5,782,780 - -0.3 5,782,780 - +0.6 5,782,780 - +0.6 5,782,780 - +1.0 5,782,780 - -0.8 5,782,798 + -0.7 5,782,798 + -1.0 5,782,798 + +0.3 5,782,802 + +0.5 5,782,803 - -0.9 5,782,809 + +0.3 5,782,810 - +0.5
Or see this region's nucleotide sequence