Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3452

Experiment: Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT3451 and BT3452 are separated by 97 nucleotidesBT3452 and BT3453 are separated by 23 nucleotides BT3451: BT3451 - phospho-N-acetylmuramoyl-pentapeptide-transferase (NCBI ptt file), at 4,445,765 to 4,447,033 BT3451 BT3452: BT3452 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (NCBI ptt file), at 4,447,131 to 4,448,579 BT3452 BT3453: BT3453 - penicillin-binding protein (NCBI ptt file), at 4,448,603 to 4,450,729 BT3453 Position (kb) 4447 4448 4449Strain fitness (log2 ratio) -1 0 1at 4447.125 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM
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4,447,125 - -1.7

Or see this region's nucleotide sequence