Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0024 and Psest_0025 are separated by 87 nucleotides Psest_0025 and Psest_0026 are separated by 155 nucleotides Psest_0026 and Psest_0027 are separated by 52 nucleotides
Psest_0024: Psest_0024 - LysM domain., at 24,677 to 25,702
_0024
Psest_0025: Psest_0025 - DNA protecting protein DprA, at 25,790 to 26,887
_0025
Psest_0026: Psest_0026 - Putative translation factor (SUA5), at 27,043 to 27,600
_0026
Psest_0027: Psest_0027 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 27,653 to 28,630
_0027
Position (kb) 25
26
27 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 24.884 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.911 kb on + strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.912 kb on - strand, within Psest_0024 at 24.936 kb on + strand, within Psest_0024 at 24.937 kb on - strand, within Psest_0024 at 24.988 kb on + strand, within Psest_0024 at 24.988 kb on + strand, within Psest_0024 at 25.097 kb on + strand, within Psest_0024 at 25.097 kb on + strand, within Psest_0024 at 25.097 kb on + strand, within Psest_0024 at 25.097 kb on + strand, within Psest_0024 at 25.097 kb on + strand, within Psest_0024 at 25.098 kb on - strand, within Psest_0024 at 25.098 kb on - strand, within Psest_0024 at 25.151 kb on + strand, within Psest_0024 at 25.151 kb on + strand, within Psest_0024 at 25.152 kb on - strand, within Psest_0024 at 25.152 kb on - strand, within Psest_0024 at 25.214 kb on + strand, within Psest_0024 at 25.214 kb on + strand, within Psest_0024 at 25.214 kb on + strand, within Psest_0024 at 25.214 kb on + strand, within Psest_0024 at 25.215 kb on - strand, within Psest_0024 at 25.215 kb on - strand, within Psest_0024 at 25.215 kb on - strand, within Psest_0024 at 25.215 kb on - strand, within Psest_0024 at 25.215 kb on - strand, within Psest_0024 at 25.215 kb on - strand, within Psest_0024 at 25.215 kb on - strand, within Psest_0024 at 25.532 kb on + strand, within Psest_0024 at 25.532 kb on + strand, within Psest_0024 at 25.533 kb on - strand, within Psest_0024 at 25.625 kb on + strand at 25.625 kb on + strand at 25.625 kb on + strand at 25.625 kb on + strand at 25.640 kb on + strand at 25.640 kb on + strand at 25.641 kb on - strand at 25.766 kb on + strand at 25.766 kb on + strand at 25.767 kb on - strand at 25.767 kb on - strand at 25.781 kb on + strand at 26.060 kb on + strand, within Psest_0025 at 26.434 kb on + strand, within Psest_0025 at 26.435 kb on - strand, within Psest_0025 at 26.558 kb on + strand, within Psest_0025 at 26.558 kb on + strand, within Psest_0025 at 26.558 kb on + strand, within Psest_0025 at 26.558 kb on + strand, within Psest_0025 at 26.558 kb on + strand, within Psest_0025 at 26.558 kb on + strand, within Psest_0025 at 26.558 kb on + strand, within Psest_0025 at 26.559 kb on - strand, within Psest_0025 at 26.559 kb on - strand, within Psest_0025 at 26.559 kb on - strand, within Psest_0025 at 26.559 kb on - strand, within Psest_0025 at 26.559 kb on - strand, within Psest_0025 at 26.886 kb on - strand at 26.886 kb on - strand at 26.971 kb on + strand at 26.971 kb on + strand at 26.972 kb on - strand at 26.972 kb on - strand at 27.825 kb on + strand, within Psest_0027
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 24,884 + Psest_0024 0.20 -1.6 24,911 + Psest_0024 0.23 -2.7 24,911 + Psest_0024 0.23 -2.8 24,911 + Psest_0024 0.23 -1.1 24,911 + Psest_0024 0.23 +0.2 24,911 + Psest_0024 0.23 +1.1 24,911 + Psest_0024 0.23 -0.3 24,911 + Psest_0024 0.23 -0.6 24,911 + Psest_0024 0.23 -1.4 24,911 + Psest_0024 0.23 +0.0 24,911 + Psest_0024 0.23 -2.5 24,911 + Psest_0024 0.23 -1.5 24,912 - Psest_0024 0.23 -0.3 24,912 - Psest_0024 0.23 +0.5 24,912 - Psest_0024 0.23 -3.3 24,912 - Psest_0024 0.23 -1.7 24,912 - Psest_0024 0.23 -0.6 24,912 - Psest_0024 0.23 -2.1 24,912 - Psest_0024 0.23 -2.8 24,912 - Psest_0024 0.23 -2.3 24,912 - Psest_0024 0.23 -2.5 24,912 - Psest_0024 0.23 -1.7 24,912 - Psest_0024 0.23 -2.7 24,912 - Psest_0024 0.23 -2.2 24,936 + Psest_0024 0.25 -0.3 24,937 - Psest_0024 0.25 -2.3 24,988 + Psest_0024 0.30 -1.7 24,988 + Psest_0024 0.30 -1.1 25,097 + Psest_0024 0.41 -1.8 25,097 + Psest_0024 0.41 +0.7 25,097 + Psest_0024 0.41 -2.6 25,097 + Psest_0024 0.41 -1.4 25,097 + Psest_0024 0.41 -1.6 25,098 - Psest_0024 0.41 -0.5 25,098 - Psest_0024 0.41 +1.1 25,151 + Psest_0024 0.46 -0.2 25,151 + Psest_0024 0.46 -2.4 25,152 - Psest_0024 0.46 -1.5 25,152 - Psest_0024 0.46 -1.4 25,214 + Psest_0024 0.52 -0.2 25,214 + Psest_0024 0.52 -0.5 25,214 + Psest_0024 0.52 -1.9 25,214 + Psest_0024 0.52 -0.9 25,215 - Psest_0024 0.52 -1.6 25,215 - Psest_0024 0.52 -1.4 25,215 - Psest_0024 0.52 -0.8 25,215 - Psest_0024 0.52 -0.6 25,215 - Psest_0024 0.52 -1.2 25,215 - Psest_0024 0.52 -0.3 25,215 - Psest_0024 0.52 -0.6 25,532 + Psest_0024 0.83 -0.2 25,532 + Psest_0024 0.83 -0.9 25,533 - Psest_0024 0.83 -0.6 25,625 + -0.7 25,625 + -1.0 25,625 + -0.4 25,625 + -0.8 25,640 + -1.8 25,640 + -2.1 25,641 - -1.9 25,766 + +1.0 25,766 + -2.5 25,767 - +0.6 25,767 - +0.4 25,781 + +0.4 26,060 + Psest_0025 0.25 +1.2 26,434 + Psest_0025 0.59 -0.2 26,435 - Psest_0025 0.59 +0.5 26,558 + Psest_0025 0.70 +0.7 26,558 + Psest_0025 0.70 +0.1 26,558 + Psest_0025 0.70 +0.6 26,558 + Psest_0025 0.70 -0.3 26,558 + Psest_0025 0.70 +1.4 26,558 + Psest_0025 0.70 -0.6 26,558 + Psest_0025 0.70 +0.2 26,559 - Psest_0025 0.70 +0.0 26,559 - Psest_0025 0.70 +1.0 26,559 - Psest_0025 0.70 +0.8 26,559 - Psest_0025 0.70 +0.2 26,559 - Psest_0025 0.70 -0.4 26,886 - -0.7 26,886 - -1.4 26,971 + +0.6 26,971 + -0.4 26,972 - +1.4 26,972 - +0.3 27,825 + Psest_0027 0.18 -0.6
Or see this region's nucleotide sequence