Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2072 and Psest_2073 are separated by 37 nucleotides Psest_2073 and Psest_2074 are separated by 14 nucleotides Psest_2074 and Psest_2075 are separated by 83 nucleotides
Psest_2072: Psest_2072 - Methyltransferase domain., at 2,201,207 to 2,201,977
_2072
Psest_2073: Psest_2073 - Ribonuclease HI, at 2,202,015 to 2,202,470
_2073
Psest_2074: Psest_2074 - DNA polymerase III, epsilon subunit, Proteobacterial, at 2,202,485 to 2,203,210
_2074
Psest_2075: Psest_2075 - Arginine/lysine/ornithine decarboxylases, at 2,203,294 to 2,205,543
_2075
Position (kb)
2202
2203
2204 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2201.656 kb on - strand, within Psest_2072 at 2201.675 kb on - strand, within Psest_2072 at 2201.747 kb on + strand, within Psest_2072 at 2201.747 kb on + strand, within Psest_2072 at 2201.840 kb on + strand, within Psest_2072 at 2201.840 kb on + strand, within Psest_2072 at 2201.840 kb on + strand, within Psest_2072 at 2201.840 kb on + strand, within Psest_2072 at 2201.841 kb on - strand, within Psest_2072 at 2201.841 kb on - strand, within Psest_2072 at 2201.841 kb on - strand, within Psest_2072 at 2201.841 kb on - strand, within Psest_2072 at 2201.841 kb on - strand, within Psest_2072 at 2201.841 kb on - strand, within Psest_2072 at 2201.841 kb on - strand, within Psest_2072 at 2201.841 kb on - strand, within Psest_2072 at 2201.844 kb on + strand, within Psest_2072 at 2201.844 kb on + strand, within Psest_2072 at 2201.845 kb on - strand, within Psest_2072 at 2202.439 kb on + strand at 2202.448 kb on + strand at 2202.448 kb on + strand at 2202.468 kb on + strand at 2202.468 kb on + strand at 2203.261 kb on - strand at 2203.267 kb on + strand at 2203.268 kb on - strand at 2203.297 kb on + strand at 2203.298 kb on - strand at 2203.298 kb on - strand at 2203.298 kb on - strand at 2203.340 kb on + strand at 2203.340 kb on + strand at 2203.340 kb on + strand at 2203.340 kb on + strand at 2203.341 kb on - strand at 2203.341 kb on - strand at 2203.341 kb on - strand at 2203.370 kb on + strand at 2203.370 kb on + strand at 2203.371 kb on - strand at 2203.660 kb on + strand, within Psest_2075 at 2203.661 kb on - strand, within Psest_2075 at 2203.661 kb on - strand, within Psest_2075 at 2203.666 kb on + strand, within Psest_2075 at 2203.667 kb on - strand, within Psest_2075 at 2203.667 kb on - strand, within Psest_2075 at 2203.667 kb on - strand, within Psest_2075 at 2203.720 kb on + strand, within Psest_2075 at 2203.721 kb on - strand, within Psest_2075 at 2203.783 kb on + strand, within Psest_2075 at 2203.784 kb on - strand, within Psest_2075 at 2203.784 kb on - strand, within Psest_2075 at 2203.784 kb on - strand, within Psest_2075 at 2204.131 kb on + strand, within Psest_2075 at 2204.131 kb on + strand, within Psest_2075 at 2204.131 kb on + strand, within Psest_2075 at 2204.131 kb on + strand, within Psest_2075 at 2204.132 kb on - strand, within Psest_2075 at 2204.132 kb on - strand, within Psest_2075 at 2204.132 kb on - strand, within Psest_2075 at 2204.132 kb on - strand, within Psest_2075 at 2204.132 kb on - strand, within Psest_2075 at 2204.132 kb on - strand, within Psest_2075 at 2204.132 kb on - strand, within Psest_2075 at 2204.156 kb on + strand, within Psest_2075 at 2204.156 kb on + strand, within Psest_2075 at 2204.157 kb on - strand, within Psest_2075
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,201,656 - Psest_2072 0.58 +0.8 2,201,675 - Psest_2072 0.61 -0.5 2,201,747 + Psest_2072 0.70 +0.4 2,201,747 + Psest_2072 0.70 -0.5 2,201,840 + Psest_2072 0.82 -1.8 2,201,840 + Psest_2072 0.82 +0.7 2,201,840 + Psest_2072 0.82 +0.9 2,201,840 + Psest_2072 0.82 +0.4 2,201,841 - Psest_2072 0.82 +0.6 2,201,841 - Psest_2072 0.82 -3.2 2,201,841 - Psest_2072 0.82 +0.9 2,201,841 - Psest_2072 0.82 +0.8 2,201,841 - Psest_2072 0.82 +1.7 2,201,841 - Psest_2072 0.82 +1.1 2,201,841 - Psest_2072 0.82 +0.4 2,201,841 - Psest_2072 0.82 -0.2 2,201,844 + Psest_2072 0.83 +0.8 2,201,844 + Psest_2072 0.83 +0.2 2,201,845 - Psest_2072 0.83 +0.1 2,202,439 + +0.3 2,202,448 + +0.2 2,202,448 + -0.7 2,202,468 + -0.1 2,202,468 + +0.1 2,203,261 - +0.9 2,203,267 + -0.2 2,203,268 - -0.2 2,203,297 + -1.8 2,203,298 - +0.4 2,203,298 - -1.4 2,203,298 - +0.4 2,203,340 + +0.6 2,203,340 + -2.4 2,203,340 + -0.7 2,203,340 + +0.1 2,203,341 - -0.0 2,203,341 - +0.6 2,203,341 - +0.1 2,203,370 + -0.2 2,203,370 + +0.5 2,203,371 - -0.8 2,203,660 + Psest_2075 0.16 +0.2 2,203,661 - Psest_2075 0.16 +0.2 2,203,661 - Psest_2075 0.16 +0.2 2,203,666 + Psest_2075 0.17 +0.4 2,203,667 - Psest_2075 0.17 +0.5 2,203,667 - Psest_2075 0.17 +0.4 2,203,667 - Psest_2075 0.17 +1.3 2,203,720 + Psest_2075 0.19 +1.6 2,203,721 - Psest_2075 0.19 +0.9 2,203,783 + Psest_2075 0.22 -0.8 2,203,784 - Psest_2075 0.22 +0.9 2,203,784 - Psest_2075 0.22 +1.0 2,203,784 - Psest_2075 0.22 +0.9 2,204,131 + Psest_2075 0.37 +0.2 2,204,131 + Psest_2075 0.37 +0.1 2,204,131 + Psest_2075 0.37 -0.1 2,204,131 + Psest_2075 0.37 -0.6 2,204,132 - Psest_2075 0.37 -0.3 2,204,132 - Psest_2075 0.37 +0.6 2,204,132 - Psest_2075 0.37 +1.6 2,204,132 - Psest_2075 0.37 -0.1 2,204,132 - Psest_2075 0.37 -0.3 2,204,132 - Psest_2075 0.37 +0.2 2,204,132 - Psest_2075 0.37 -1.2 2,204,156 + Psest_2075 0.38 +0.1 2,204,156 + Psest_2075 0.38 +0.1 2,204,157 - Psest_2075 0.38 +0.0
Or see this region's nucleotide sequence