Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2379 and Psest_2380 overlap by 41 nucleotides Psest_2380 and Psest_2381 are separated by 326 nucleotides
Psest_2379: Psest_2379 - PAS domain S-box, at 2,529,008 to 2,531,617
_2379
Psest_2380: Psest_2380 - Uncharacterized conserved protein, at 2,531,577 to 2,532,740
_2380
Psest_2381: Psest_2381 - hypothetical protein, at 2,533,067 to 2,534,272
_2381
Position (kb)
2531
2532
2533 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2530.579 kb on - strand, within Psest_2379 at 2531.037 kb on + strand, within Psest_2379 at 2531.038 kb on - strand, within Psest_2379 at 2531.209 kb on + strand, within Psest_2379 at 2531.467 kb on - strand at 2531.467 kb on - strand at 2531.467 kb on - strand at 2531.467 kb on - strand at 2531.662 kb on + strand at 2531.884 kb on + strand, within Psest_2380 at 2531.884 kb on + strand, within Psest_2380 at 2531.884 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.932 kb on + strand, within Psest_2380 at 2531.933 kb on - strand, within Psest_2380 at 2531.933 kb on - strand, within Psest_2380 at 2531.933 kb on - strand, within Psest_2380 at 2531.933 kb on - strand, within Psest_2380 at 2531.933 kb on - strand, within Psest_2380 at 2531.933 kb on - strand, within Psest_2380 at 2531.935 kb on + strand, within Psest_2380 at 2531.936 kb on - strand, within Psest_2380 at 2532.003 kb on + strand, within Psest_2380 at 2532.022 kb on + strand, within Psest_2380 at 2532.022 kb on + strand, within Psest_2380 at 2532.022 kb on + strand, within Psest_2380 at 2532.022 kb on + strand, within Psest_2380 at 2532.022 kb on + strand, within Psest_2380 at 2532.023 kb on - strand, within Psest_2380 at 2532.023 kb on - strand, within Psest_2380 at 2532.056 kb on - strand, within Psest_2380 at 2532.163 kb on - strand, within Psest_2380 at 2532.184 kb on + strand, within Psest_2380 at 2532.185 kb on - strand, within Psest_2380 at 2532.185 kb on - strand, within Psest_2380 at 2532.185 kb on - strand, within Psest_2380 at 2532.185 kb on - strand, within Psest_2380 at 2532.200 kb on - strand, within Psest_2380 at 2532.202 kb on + strand, within Psest_2380 at 2532.202 kb on + strand, within Psest_2380 at 2532.203 kb on - strand, within Psest_2380 at 2532.203 kb on - strand, within Psest_2380 at 2532.203 kb on - strand, within Psest_2380 at 2532.203 kb on - strand, within Psest_2380 at 2532.203 kb on - strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.208 kb on + strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.209 kb on - strand, within Psest_2380 at 2532.212 kb on + strand, within Psest_2380 at 2532.212 kb on + strand, within Psest_2380 at 2532.213 kb on - strand, within Psest_2380 at 2532.213 kb on - strand, within Psest_2380 at 2532.213 kb on - strand, within Psest_2380 at 2532.522 kb on - strand, within Psest_2380 at 2532.522 kb on - strand, within Psest_2380 at 2532.568 kb on + strand, within Psest_2380 at 2532.605 kb on - strand, within Psest_2380 at 2532.717 kb on + strand at 2532.718 kb on - strand at 2532.793 kb on + strand at 2532.809 kb on + strand at 2532.810 kb on - strand at 2532.835 kb on + strand at 2532.835 kb on + strand at 2532.835 kb on + strand at 2532.836 kb on - strand at 2532.836 kb on - strand at 2532.839 kb on + strand at 2532.869 kb on + strand at 2532.992 kb on + strand at 2532.992 kb on + strand at 2532.992 kb on + strand at 2532.993 kb on - strand at 2532.993 kb on - strand at 2533.026 kb on + strand at 2533.026 kb on + strand at 2533.026 kb on + strand at 2533.027 kb on - strand at 2533.027 kb on - strand at 2533.069 kb on - strand at 2533.069 kb on - strand at 2533.069 kb on - strand at 2533.069 kb on - strand at 2533.234 kb on + strand, within Psest_2381 at 2533.303 kb on - strand, within Psest_2381 at 2533.527 kb on + strand, within Psest_2381 at 2533.527 kb on + strand, within Psest_2381 at 2533.527 kb on + strand, within Psest_2381 at 2533.527 kb on + strand, within Psest_2381 at 2533.527 kb on + strand, within Psest_2381 at 2533.527 kb on + strand, within Psest_2381 at 2533.527 kb on + strand, within Psest_2381 at 2533.528 kb on - strand, within Psest_2381 at 2533.528 kb on - strand, within Psest_2381 at 2533.557 kb on + strand, within Psest_2381 at 2533.611 kb on + strand, within Psest_2381 at 2533.643 kb on - strand, within Psest_2381 at 2533.645 kb on + strand, within Psest_2381 at 2533.646 kb on - strand, within Psest_2381 at 2533.646 kb on - strand, within Psest_2381 at 2533.705 kb on - strand, within Psest_2381 at 2533.705 kb on - strand, within Psest_2381 at 2533.705 kb on - strand, within Psest_2381
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,530,579 - Psest_2379 0.60 -3.3 2,531,037 + Psest_2379 0.78 -2.1 2,531,038 - Psest_2379 0.78 -1.9 2,531,209 + Psest_2379 0.84 -2.1 2,531,467 - -3.1 2,531,467 - -0.9 2,531,467 - -2.1 2,531,467 - -2.6 2,531,662 + -0.9 2,531,884 + Psest_2380 0.26 -1.3 2,531,884 + Psest_2380 0.26 -1.3 2,531,884 + Psest_2380 0.26 -1.5 2,531,932 + Psest_2380 0.30 -1.4 2,531,932 + Psest_2380 0.30 -1.0 2,531,932 + Psest_2380 0.30 -2.7 2,531,932 + Psest_2380 0.30 -2.0 2,531,932 + Psest_2380 0.30 -3.2 2,531,932 + Psest_2380 0.30 -1.1 2,531,932 + Psest_2380 0.30 -1.6 2,531,932 + Psest_2380 0.30 -1.1 2,531,932 + Psest_2380 0.30 -1.2 2,531,933 - Psest_2380 0.31 +0.4 2,531,933 - Psest_2380 0.31 -1.1 2,531,933 - Psest_2380 0.31 -2.1 2,531,933 - Psest_2380 0.31 -1.4 2,531,933 - Psest_2380 0.31 -1.1 2,531,933 - Psest_2380 0.31 -1.6 2,531,935 + Psest_2380 0.31 -0.9 2,531,936 - Psest_2380 0.31 -2.0 2,532,003 + Psest_2380 0.37 -2.6 2,532,022 + Psest_2380 0.38 -3.2 2,532,022 + Psest_2380 0.38 -2.3 2,532,022 + Psest_2380 0.38 -3.0 2,532,022 + Psest_2380 0.38 -2.5 2,532,022 + Psest_2380 0.38 -3.1 2,532,023 - Psest_2380 0.38 -2.3 2,532,023 - Psest_2380 0.38 -2.6 2,532,056 - Psest_2380 0.41 -1.1 2,532,163 - Psest_2380 0.50 -1.1 2,532,184 + Psest_2380 0.52 -1.8 2,532,185 - Psest_2380 0.52 -2.7 2,532,185 - Psest_2380 0.52 +0.1 2,532,185 - Psest_2380 0.52 -2.3 2,532,185 - Psest_2380 0.52 -1.5 2,532,200 - Psest_2380 0.54 -1.9 2,532,202 + Psest_2380 0.54 +0.9 2,532,202 + Psest_2380 0.54 +0.1 2,532,203 - Psest_2380 0.54 -2.1 2,532,203 - Psest_2380 0.54 -1.8 2,532,203 - Psest_2380 0.54 -4.0 2,532,203 - Psest_2380 0.54 -1.8 2,532,203 - Psest_2380 0.54 -0.7 2,532,208 + Psest_2380 0.54 -1.2 2,532,208 + Psest_2380 0.54 -1.9 2,532,208 + Psest_2380 0.54 -1.1 2,532,208 + Psest_2380 0.54 -1.7 2,532,208 + Psest_2380 0.54 -2.3 2,532,208 + Psest_2380 0.54 -1.8 2,532,208 + Psest_2380 0.54 -3.5 2,532,208 + Psest_2380 0.54 -1.9 2,532,208 + Psest_2380 0.54 -1.9 2,532,208 + Psest_2380 0.54 -1.5 2,532,208 + Psest_2380 0.54 -1.3 2,532,208 + Psest_2380 0.54 -1.7 2,532,208 + Psest_2380 0.54 -2.1 2,532,208 + Psest_2380 0.54 -2.3 2,532,208 + Psest_2380 0.54 -0.5 2,532,208 + Psest_2380 0.54 -2.0 2,532,208 + Psest_2380 0.54 +1.2 2,532,208 + Psest_2380 0.54 -3.1 2,532,208 + Psest_2380 0.54 -1.6 2,532,208 + Psest_2380 0.54 -2.3 2,532,208 + Psest_2380 0.54 -1.6 2,532,208 + Psest_2380 0.54 -0.6 2,532,208 + Psest_2380 0.54 -0.6 2,532,208 + Psest_2380 0.54 -1.9 2,532,208 + Psest_2380 0.54 -2.3 2,532,208 + Psest_2380 0.54 -1.9 2,532,208 + Psest_2380 0.54 -1.1 2,532,208 + Psest_2380 0.54 +0.4 2,532,209 - Psest_2380 0.54 -2.1 2,532,209 - Psest_2380 0.54 -1.9 2,532,209 - Psest_2380 0.54 -1.8 2,532,209 - Psest_2380 0.54 -2.4 2,532,209 - Psest_2380 0.54 -2.3 2,532,209 - Psest_2380 0.54 -1.4 2,532,209 - Psest_2380 0.54 -2.3 2,532,209 - Psest_2380 0.54 -1.3 2,532,209 - Psest_2380 0.54 +0.2 2,532,209 - Psest_2380 0.54 -2.0 2,532,209 - Psest_2380 0.54 -2.6 2,532,209 - Psest_2380 0.54 +0.7 2,532,209 - Psest_2380 0.54 -0.4 2,532,209 - Psest_2380 0.54 -2.2 2,532,209 - Psest_2380 0.54 -1.8 2,532,209 - Psest_2380 0.54 -1.6 2,532,209 - Psest_2380 0.54 -1.9 2,532,209 - Psest_2380 0.54 -0.6 2,532,209 - Psest_2380 0.54 -2.1 2,532,209 - Psest_2380 0.54 -1.7 2,532,209 - Psest_2380 0.54 -2.7 2,532,209 - Psest_2380 0.54 -2.6 2,532,209 - Psest_2380 0.54 +0.9 2,532,209 - Psest_2380 0.54 -2.8 2,532,209 - Psest_2380 0.54 -2.0 2,532,209 - Psest_2380 0.54 -1.8 2,532,209 - Psest_2380 0.54 -2.4 2,532,209 - Psest_2380 0.54 -2.8 2,532,209 - Psest_2380 0.54 -1.0 2,532,209 - Psest_2380 0.54 -0.9 2,532,209 - Psest_2380 0.54 -2.0 2,532,209 - Psest_2380 0.54 -1.9 2,532,209 - Psest_2380 0.54 -2.5 2,532,209 - Psest_2380 0.54 -1.7 2,532,209 - Psest_2380 0.54 -1.2 2,532,209 - Psest_2380 0.54 -1.3 2,532,209 - Psest_2380 0.54 -3.4 2,532,212 + Psest_2380 0.55 -1.5 2,532,212 + Psest_2380 0.55 -1.4 2,532,213 - Psest_2380 0.55 +1.2 2,532,213 - Psest_2380 0.55 -3.1 2,532,213 - Psest_2380 0.55 -2.6 2,532,522 - Psest_2380 0.81 -1.2 2,532,522 - Psest_2380 0.81 -1.5 2,532,568 + Psest_2380 0.85 -2.1 2,532,605 - Psest_2380 0.88 +0.0 2,532,717 + -2.3 2,532,718 - -1.1 2,532,793 + -1.3 2,532,809 + -2.6 2,532,810 - -0.9 2,532,835 + -0.5 2,532,835 + -0.5 2,532,835 + -1.1 2,532,836 - -0.1 2,532,836 - -0.5 2,532,839 + -0.6 2,532,869 + +0.7 2,532,992 + +0.1 2,532,992 + +0.1 2,532,992 + -0.8 2,532,993 - +0.0 2,532,993 - -0.3 2,533,026 + -0.1 2,533,026 + -0.4 2,533,026 + -0.1 2,533,027 - +0.4 2,533,027 - -0.5 2,533,069 - -1.1 2,533,069 - -0.2 2,533,069 - -1.0 2,533,069 - -0.3 2,533,234 + Psest_2381 0.14 +1.0 2,533,303 - Psest_2381 0.20 -0.4 2,533,527 + Psest_2381 0.38 -0.3 2,533,527 + Psest_2381 0.38 +0.1 2,533,527 + Psest_2381 0.38 -0.7 2,533,527 + Psest_2381 0.38 +1.7 2,533,527 + Psest_2381 0.38 -1.6 2,533,527 + Psest_2381 0.38 -0.0 2,533,527 + Psest_2381 0.38 -0.1 2,533,528 - Psest_2381 0.38 +0.6 2,533,528 - Psest_2381 0.38 -0.3 2,533,557 + Psest_2381 0.41 +0.8 2,533,611 + Psest_2381 0.45 +0.8 2,533,643 - Psest_2381 0.48 -0.6 2,533,645 + Psest_2381 0.48 -1.1 2,533,646 - Psest_2381 0.48 -0.3 2,533,646 - Psest_2381 0.48 -1.3 2,533,705 - Psest_2381 0.53 +0.3 2,533,705 - Psest_2381 0.53 -1.1 2,533,705 - Psest_2381 0.53 -0.0
Or see this region's nucleotide sequence