Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2381 and Psest_2382 are separated by 270 nucleotides Psest_2382 and Psest_2383 are separated by 34 nucleotides
Psest_2381: Psest_2381 - hypothetical protein, at 2,533,067 to 2,534,272
_2381
Psest_2382: Psest_2382 - coenzyme PQQ biosynthesis probable peptidase PqqF, at 2,534,543 to 2,537,083
_2382
Psest_2383: Psest_2383 - Predicted transcriptional regulators, at 2,537,118 to 2,538,065
_2383
Position (kb)
2534
2535
2536
2537
2538 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2533.557 kb on + strand, within Psest_2381 at 2533.611 kb on + strand, within Psest_2381 at 2533.643 kb on - strand, within Psest_2381 at 2533.645 kb on + strand, within Psest_2381 at 2533.646 kb on - strand, within Psest_2381 at 2533.646 kb on - strand, within Psest_2381 at 2533.705 kb on - strand, within Psest_2381 at 2533.705 kb on - strand, within Psest_2381 at 2533.705 kb on - strand, within Psest_2381 at 2533.911 kb on + strand, within Psest_2381 at 2533.912 kb on - strand, within Psest_2381 at 2533.922 kb on + strand, within Psest_2381 at 2533.922 kb on + strand, within Psest_2381 at 2533.922 kb on + strand, within Psest_2381 at 2533.923 kb on - strand, within Psest_2381 at 2533.923 kb on - strand, within Psest_2381 at 2533.923 kb on - strand, within Psest_2381 at 2533.923 kb on - strand, within Psest_2381 at 2533.923 kb on - strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.118 kb on + strand, within Psest_2381 at 2534.119 kb on - strand, within Psest_2381 at 2534.119 kb on - strand, within Psest_2381 at 2534.119 kb on - strand, within Psest_2381 at 2534.119 kb on - strand, within Psest_2381 at 2534.119 kb on - strand, within Psest_2381 at 2534.134 kb on - strand, within Psest_2381 at 2534.169 kb on + strand at 2534.170 kb on - strand at 2534.170 kb on - strand at 2534.288 kb on - strand at 2534.344 kb on + strand at 2534.344 kb on + strand at 2534.344 kb on + strand at 2534.344 kb on + strand at 2534.344 kb on + strand at 2534.344 kb on + strand at 2534.344 kb on + strand at 2534.344 kb on + strand at 2534.344 kb on + strand at 2534.345 kb on - strand at 2534.345 kb on - strand at 2534.345 kb on - strand at 2534.345 kb on - strand at 2534.345 kb on - strand at 2534.410 kb on - strand at 2534.410 kb on - strand at 2534.436 kb on + strand at 2534.436 kb on + strand at 2534.436 kb on + strand at 2534.437 kb on - strand at 2534.437 kb on - strand at 2534.437 kb on - strand at 2534.437 kb on - strand at 2534.437 kb on - strand at 2534.443 kb on + strand at 2534.444 kb on - strand at 2535.212 kb on + strand, within Psest_2382 at 2535.213 kb on - strand, within Psest_2382 at 2535.278 kb on - strand, within Psest_2382 at 2535.278 kb on - strand, within Psest_2382 at 2535.280 kb on + strand, within Psest_2382 at 2535.280 kb on + strand, within Psest_2382 at 2535.281 kb on - strand, within Psest_2382 at 2535.281 kb on - strand, within Psest_2382 at 2535.336 kb on - strand, within Psest_2382 at 2535.341 kb on + strand, within Psest_2382 at 2535.341 kb on + strand, within Psest_2382 at 2535.341 kb on + strand, within Psest_2382 at 2535.342 kb on - strand, within Psest_2382 at 2535.342 kb on - strand, within Psest_2382 at 2535.342 kb on - strand, within Psest_2382 at 2535.622 kb on - strand, within Psest_2382 at 2535.622 kb on - strand, within Psest_2382 at 2535.622 kb on - strand, within Psest_2382 at 2535.704 kb on + strand, within Psest_2382 at 2535.833 kb on - strand, within Psest_2382 at 2536.023 kb on + strand, within Psest_2382 at 2536.023 kb on + strand, within Psest_2382 at 2536.024 kb on - strand, within Psest_2382 at 2536.024 kb on - strand, within Psest_2382 at 2536.024 kb on - strand, within Psest_2382 at 2536.024 kb on - strand, within Psest_2382 at 2536.065 kb on + strand, within Psest_2382 at 2536.223 kb on - strand, within Psest_2382 at 2536.484 kb on + strand, within Psest_2382 at 2536.506 kb on + strand, within Psest_2382 at 2536.506 kb on + strand, within Psest_2382 at 2536.506 kb on + strand, within Psest_2382 at 2536.507 kb on - strand, within Psest_2382 at 2536.507 kb on - strand, within Psest_2382 at 2536.683 kb on - strand, within Psest_2382 at 2536.683 kb on - strand, within Psest_2382 at 2536.683 kb on - strand, within Psest_2382 at 2536.738 kb on + strand, within Psest_2382 at 2537.656 kb on + strand, within Psest_2383 at 2537.656 kb on + strand, within Psest_2383 at 2537.657 kb on - strand, within Psest_2383 at 2537.657 kb on - strand, within Psest_2383 at 2537.657 kb on - strand, within Psest_2383 at 2537.657 kb on - strand, within Psest_2383 at 2537.677 kb on + strand, within Psest_2383 at 2537.677 kb on + strand, within Psest_2383 at 2537.678 kb on - strand, within Psest_2383 at 2537.678 kb on - strand, within Psest_2383 at 2537.678 kb on - strand, within Psest_2383 at 2537.678 kb on - strand, within Psest_2383 at 2537.891 kb on - strand, within Psest_2383 at 2537.912 kb on + strand, within Psest_2383 at 2537.912 kb on + strand, within Psest_2383 at 2538.006 kb on + strand at 2538.006 kb on + strand at 2538.006 kb on + strand at 2538.007 kb on - strand at 2538.007 kb on - strand at 2538.007 kb on - strand at 2538.007 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,533,557 + Psest_2381 0.41 -0.1 2,533,611 + Psest_2381 0.45 +0.6 2,533,643 - Psest_2381 0.48 -0.4 2,533,645 + Psest_2381 0.48 +0.2 2,533,646 - Psest_2381 0.48 -0.9 2,533,646 - Psest_2381 0.48 +1.1 2,533,705 - Psest_2381 0.53 -0.8 2,533,705 - Psest_2381 0.53 +0.5 2,533,705 - Psest_2381 0.53 +0.5 2,533,911 + Psest_2381 0.70 +0.4 2,533,912 - Psest_2381 0.70 -0.2 2,533,922 + Psest_2381 0.71 +0.1 2,533,922 + Psest_2381 0.71 -0.0 2,533,922 + Psest_2381 0.71 +0.1 2,533,923 - Psest_2381 0.71 -1.5 2,533,923 - Psest_2381 0.71 -0.1 2,533,923 - Psest_2381 0.71 -0.2 2,533,923 - Psest_2381 0.71 -1.1 2,533,923 - Psest_2381 0.71 -0.3 2,534,118 + Psest_2381 0.87 +0.6 2,534,118 + Psest_2381 0.87 +1.1 2,534,118 + Psest_2381 0.87 -0.2 2,534,118 + Psest_2381 0.87 -1.3 2,534,118 + Psest_2381 0.87 -0.6 2,534,118 + Psest_2381 0.87 +0.6 2,534,118 + Psest_2381 0.87 +0.7 2,534,118 + Psest_2381 0.87 -2.2 2,534,118 + Psest_2381 0.87 -0.1 2,534,119 - Psest_2381 0.87 +1.5 2,534,119 - Psest_2381 0.87 +0.6 2,534,119 - Psest_2381 0.87 -0.4 2,534,119 - Psest_2381 0.87 +0.2 2,534,119 - Psest_2381 0.87 +1.4 2,534,134 - Psest_2381 0.88 +0.1 2,534,169 + +0.2 2,534,170 - -0.2 2,534,170 - -0.1 2,534,288 - +0.9 2,534,344 + +1.2 2,534,344 + -1.3 2,534,344 + -0.7 2,534,344 + -0.1 2,534,344 + -1.2 2,534,344 + -0.1 2,534,344 + -1.8 2,534,344 + -1.2 2,534,344 + +0.4 2,534,345 - -0.0 2,534,345 - -0.9 2,534,345 - +0.2 2,534,345 - -1.6 2,534,345 - +0.3 2,534,410 - +0.3 2,534,410 - +0.6 2,534,436 + +1.1 2,534,436 + +1.8 2,534,436 + -0.6 2,534,437 - +0.0 2,534,437 - -0.9 2,534,437 - +0.7 2,534,437 - +1.7 2,534,437 - -0.0 2,534,443 + -1.0 2,534,444 - +0.2 2,535,212 + Psest_2382 0.26 -1.5 2,535,213 - Psest_2382 0.26 -1.3 2,535,278 - Psest_2382 0.29 -0.5 2,535,278 - Psest_2382 0.29 -1.1 2,535,280 + Psest_2382 0.29 -2.0 2,535,280 + Psest_2382 0.29 -1.6 2,535,281 - Psest_2382 0.29 -2.8 2,535,281 - Psest_2382 0.29 -1.3 2,535,336 - Psest_2382 0.31 -1.8 2,535,341 + Psest_2382 0.31 -1.1 2,535,341 + Psest_2382 0.31 -2.4 2,535,341 + Psest_2382 0.31 -1.7 2,535,342 - Psest_2382 0.31 -0.4 2,535,342 - Psest_2382 0.31 -0.4 2,535,342 - Psest_2382 0.31 -1.3 2,535,622 - Psest_2382 0.42 -3.0 2,535,622 - Psest_2382 0.42 -0.9 2,535,622 - Psest_2382 0.42 -2.0 2,535,704 + Psest_2382 0.46 -1.5 2,535,833 - Psest_2382 0.51 -0.9 2,536,023 + Psest_2382 0.58 -1.1 2,536,023 + Psest_2382 0.58 -1.7 2,536,024 - Psest_2382 0.58 -0.9 2,536,024 - Psest_2382 0.58 -0.6 2,536,024 - Psest_2382 0.58 -0.8 2,536,024 - Psest_2382 0.58 -2.5 2,536,065 + Psest_2382 0.60 -1.2 2,536,223 - Psest_2382 0.66 -0.0 2,536,484 + Psest_2382 0.76 -0.7 2,536,506 + Psest_2382 0.77 +0.4 2,536,506 + Psest_2382 0.77 -1.1 2,536,506 + Psest_2382 0.77 -2.1 2,536,507 - Psest_2382 0.77 -1.6 2,536,507 - Psest_2382 0.77 -1.2 2,536,683 - Psest_2382 0.84 -0.5 2,536,683 - Psest_2382 0.84 -2.4 2,536,683 - Psest_2382 0.84 -1.2 2,536,738 + Psest_2382 0.86 -3.9 2,537,656 + Psest_2383 0.57 -1.4 2,537,656 + Psest_2383 0.57 -1.7 2,537,657 - Psest_2383 0.57 -1.0 2,537,657 - Psest_2383 0.57 -1.2 2,537,657 - Psest_2383 0.57 -0.9 2,537,657 - Psest_2383 0.57 -0.5 2,537,677 + Psest_2383 0.59 -0.1 2,537,677 + Psest_2383 0.59 -1.8 2,537,678 - Psest_2383 0.59 -0.8 2,537,678 - Psest_2383 0.59 -0.5 2,537,678 - Psest_2383 0.59 -0.2 2,537,678 - Psest_2383 0.59 -0.8 2,537,891 - Psest_2383 0.82 -0.6 2,537,912 + Psest_2383 0.84 -1.6 2,537,912 + Psest_2383 0.84 -1.0 2,538,006 + -1.4 2,538,006 + -2.0 2,538,006 + -1.4 2,538,007 - -0.4 2,538,007 - -0.5 2,538,007 - -0.8 2,538,007 - -0.5
Or see this region's nucleotide sequence