Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2910

Experiment: nitrite 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 2.5 mM
3,100,565	-		Psest_2909	0.30	-0.8
3,100,575	-		Psest_2909	0.32	+0.1
3,100,780	+		Psest_2909	0.59	-0.9
3,100,976	+		Psest_2909	0.84	-2.6
3,100,976	+		Psest_2909	0.84	+1.8
3,100,976	+		Psest_2909	0.84	-0.8
3,100,976	+		Psest_2909	0.84	-1.7
3,100,977	-		Psest_2909	0.85	+2.5
3,100,977	-		Psest_2909	0.85	-1.9
3,101,108	-				-0.6
3,101,108	-				-1.0
3,101,108	-				+0.4
3,101,109	+				+0.4
3,101,109	+				-0.6
3,101,109	+				+0.9
3,101,110	-				+0.3
3,101,110	-				-1.1
3,101,110	-				-0.0
3,101,110	-				+0.8
3,101,110	-				+2.9
3,101,110	-				-0.6
3,101,117	+				+1.3
3,101,117	+				+0.1
3,101,197	+				+0.9
3,101,197	+				-1.5
3,101,197	+				+1.7
3,101,197	+				+0.7
3,101,304	+				-0.4
3,101,305	-				-0.1
3,101,319	+				-0.9
3,101,541	-				-0.2
3,101,565	+				+0.3
3,101,565	+				+0.6
3,101,565	+				+0.3
3,101,565	+				+1.1
3,101,565	+				-1.5
3,101,565	+				-1.2
3,101,565	+				-0.4
3,101,565	+				-2.0
3,101,565	+				+1.4
3,101,565	+				-1.4
3,101,565	+				-1.1
3,101,565	+				-0.5
3,101,565	+				+0.8
3,101,565	+				+1.0
3,101,565	+				-2.7
3,101,565	+				+0.3
3,101,565	+				+2.3
3,101,675	+				-0.6
3,101,675	+				+0.1
3,101,675	+				+1.1
3,101,676	-				+1.3
3,101,676	-				+0.9
3,101,705	+				+0.6
3,101,705	+				-0.3
3,101,705	+				-1.9
3,101,706	-				+1.5
3,101,706	-				+1.6
3,101,774	+		Psest_2910	0.11	-0.6
3,101,774	+		Psest_2910	0.11	+1.5
3,101,867	+		Psest_2910	0.16	-0.3
3,101,867	+		Psest_2910	0.16	+0.2
3,101,867	+		Psest_2910	0.16	-1.9
3,101,867	+		Psest_2910	0.16	+0.6
3,101,867	+		Psest_2910	0.16	-0.9
3,101,867	+		Psest_2910	0.16	-0.6
3,101,867	+		Psest_2910	0.16	+0.5
3,101,867	+		Psest_2910	0.16	+0.0
3,101,867	+		Psest_2910	0.16	-0.9
3,101,867	+		Psest_2910	0.16	+1.2
3,101,867	+		Psest_2910	0.16	-0.5
3,101,867	+		Psest_2910	0.16	+1.5
3,101,867	+		Psest_2910	0.16	+0.5
3,101,868	-		Psest_2910	0.16	+1.7
3,101,868	-		Psest_2910	0.16	-3.0
3,101,868	-		Psest_2910	0.16	+0.4
3,101,868	-		Psest_2910	0.16	-0.0
3,101,868	-		Psest_2910	0.16	-0.9
3,101,868	-		Psest_2910	0.16	+0.7
3,101,894	+		Psest_2910	0.17	-0.4
3,101,894	+		Psest_2910	0.17	-3.0
3,101,894	+		Psest_2910	0.17	-0.7
3,101,894	+		Psest_2910	0.17	+1.6
3,101,894	+		Psest_2910	0.17	+0.2
3,101,894	+		Psest_2910	0.17	-0.4
3,101,894	+		Psest_2910	0.17	-0.9
3,101,894	+		Psest_2910	0.17	-0.5
3,101,894	+		Psest_2910	0.17	+1.4
3,101,894	+		Psest_2910	0.17	-0.7
3,101,894	+		Psest_2910	0.17	-1.4
3,101,894	+		Psest_2910	0.17	-2.3
3,101,894	+		Psest_2910	0.17	+1.0
3,101,894	+		Psest_2910	0.17	-0.2
3,101,894	+		Psest_2910	0.17	-0.2
3,101,894	+		Psest_2910	0.17	-3.6
3,101,894	+		Psest_2910	0.17	+0.5
3,101,894	+		Psest_2910	0.17	-0.1
3,101,894	+		Psest_2910	0.17	+1.8
3,101,894	+		Psest_2910	0.17	+1.5
3,101,894	+		Psest_2910	0.17	-1.8
3,101,894	+		Psest_2910	0.17	-2.0
3,101,894	+		Psest_2910	0.17	+0.2
3,101,895	-		Psest_2910	0.17	-0.1
3,101,895	-		Psest_2910	0.17	+1.9
3,101,895	-		Psest_2910	0.17	+0.2
3,101,895	-		Psest_2910	0.17	+2.2
3,101,895	-		Psest_2910	0.17	-0.4
3,101,895	-		Psest_2910	0.17	+0.4
3,101,895	-		Psest_2910	0.17	-0.1
3,101,895	-		Psest_2910	0.17	-1.2
3,101,895	-		Psest_2910	0.17	-2.5
3,101,895	-		Psest_2910	0.17	-0.9
3,101,895	-		Psest_2910	0.17	-0.8
3,101,895	-		Psest_2910	0.17	-0.9
3,101,895	-		Psest_2910	0.17	+0.8
3,101,895	-		Psest_2910	0.17	+0.4
3,101,895	-		Psest_2910	0.17	-0.6
3,101,895	-		Psest_2910	0.17	+0.1
3,101,895	-		Psest_2910	0.17	+0.5
3,101,895	-		Psest_2910	0.17	-1.3
3,101,895	-		Psest_2910	0.17	+0.0
3,101,895	-		Psest_2910	0.17	+0.9
3,101,895	-		Psest_2910	0.17	-0.7
3,101,895	-		Psest_2910	0.17	-0.7
3,101,895	-		Psest_2910	0.17	-0.7
3,101,895	-		Psest_2910	0.17	+0.1
3,101,895	-		Psest_2910	0.17	-1.8
3,101,895	-		Psest_2910	0.17	+0.7
3,101,895	-		Psest_2910	0.17	+1.9
3,101,895	-		Psest_2910	0.17	+1.3
3,101,895	-		Psest_2910	0.17	+0.7
3,101,895	-		Psest_2910	0.17	-0.3
3,101,895	-		Psest_2910	0.17	-1.4
3,101,895	-		Psest_2910	0.17	+0.5
3,101,895	-		Psest_2910	0.17	+0.7
3,101,895	-		Psest_2910	0.17	+0.4
3,101,895	-		Psest_2910	0.17	-0.8
3,101,910	-		Psest_2910	0.18	+1.7
3,101,910	-		Psest_2910	0.18	+0.3
3,101,966	+		Psest_2910	0.21	+2.4
3,101,966	+		Psest_2910	0.21	+0.3
3,101,966	+		Psest_2910	0.21	+0.2
3,101,966	+		Psest_2910	0.21	+2.7
3,101,966	+		Psest_2910	0.21	-0.0
3,101,966	+		Psest_2910	0.21	-0.4
3,101,966	+		Psest_2910	0.21	+0.5
3,101,966	+		Psest_2910	0.21	-0.8
3,101,967	-		Psest_2910	0.21	-0.6
3,101,967	-		Psest_2910	0.21	+3.8
3,101,967	-		Psest_2910	0.21	-0.3
3,101,967	-		Psest_2910	0.21	-0.9
3,101,967	-		Psest_2910	0.21	+1.5
3,101,967	-		Psest_2910	0.21	-0.3
3,101,967	-		Psest_2910	0.21	+0.5
3,101,967	-		Psest_2910	0.21	+0.1
3,101,967	-		Psest_2910	0.21	+0.7
3,101,967	-		Psest_2910	0.21	+0.9
3,101,969	+		Psest_2910	0.21	-1.6
3,101,970	-		Psest_2910	0.21	+2.0
3,102,011	+		Psest_2910	0.23	+0.2
3,102,011	+		Psest_2910	0.23	+0.3
3,102,011	+		Psest_2910	0.23	-0.2
3,102,011	+		Psest_2910	0.23	+2.0
3,102,011	+		Psest_2910	0.23	-1.4
3,102,011	+		Psest_2910	0.23	+1.0
3,102,011	+		Psest_2910	0.23	-1.0
3,102,011	+		Psest_2910	0.23	-1.0
3,102,011	+		Psest_2910	0.23	-0.4
3,102,012	-		Psest_2910	0.23	-0.9
3,102,012	-		Psest_2910	0.23	+0.1
3,102,012	-		Psest_2910	0.23	-0.8
3,102,012	-		Psest_2910	0.23	-1.1
3,102,012	-		Psest_2910	0.23	-2.0
3,102,012	-		Psest_2910	0.23	-0.8
3,102,012	-		Psest_2910	0.23	-0.3
3,102,012	-		Psest_2910	0.23	+0.1
3,102,012	-		Psest_2910	0.23	+0.2
3,102,012	-		Psest_2910	0.23	-1.6
3,102,012	-		Psest_2910	0.23	+1.6
3,102,012	-		Psest_2910	0.23	-0.9
3,102,227	+		Psest_2910	0.33	+0.6
3,102,227	+		Psest_2910	0.33	-0.8
3,102,227	+		Psest_2910	0.33	+0.5
3,102,227	+		Psest_2910	0.33	+0.1
3,102,227	+		Psest_2910	0.33	-0.9
3,102,227	+		Psest_2910	0.33	-0.1
3,102,227	+		Psest_2910	0.33	+3.2
3,102,227	+		Psest_2910	0.33	+2.3
3,102,227	+		Psest_2910	0.33	+1.7
3,102,227	+		Psest_2910	0.33	-1.7
3,102,227	+		Psest_2910	0.33	+1.2
3,102,228	-		Psest_2910	0.33	-0.7
3,102,228	-		Psest_2910	0.33	+0.1
3,102,228	-		Psest_2910	0.33	-0.4
3,102,228	-		Psest_2910	0.33	-1.8
3,102,228	-		Psest_2910	0.33	+0.4
3,102,228	-		Psest_2910	0.33	-0.5
3,102,390	-		Psest_2910	0.41	+0.9
3,102,390	-		Psest_2910	0.41	+2.6
3,102,399	-		Psest_2910	0.41	-3.2
3,102,399	-		Psest_2910	0.41	+0.2
3,102,399	-		Psest_2910	0.41	+1.1
3,102,401	+		Psest_2910	0.41	+0.1
3,102,422	+		Psest_2910	0.42	+1.0
3,102,422	+		Psest_2910	0.42	+2.8
3,102,422	+		Psest_2910	0.42	-0.8
3,102,422	+		Psest_2910	0.42	-0.9
3,102,422	+		Psest_2910	0.42	+0.7
3,102,422	+		Psest_2910	0.42	+3.3
3,102,422	+		Psest_2910	0.42	+0.2
3,102,422	+		Psest_2910	0.42	-1.6
3,102,422	+		Psest_2910	0.42	+0.3
3,102,422	+		Psest_2910	0.42	-0.6
3,102,422	+		Psest_2910	0.42	-0.9
3,102,423	-		Psest_2910	0.43	+0.0
3,102,423	-		Psest_2910	0.43	+0.7
3,102,423	-		Psest_2910	0.43	-0.6
3,102,423	-		Psest_2910	0.43	+0.8
3,102,423	-		Psest_2910	0.43	-0.9
3,102,423	-		Psest_2910	0.43	+2.0
3,102,906	+		Psest_2910	0.66	-2.6
3,102,906	+		Psest_2910	0.66	+0.5
3,102,906	+		Psest_2910	0.66	-0.6
3,102,906	+		Psest_2910	0.66	-0.2
3,102,906	+		Psest_2910	0.66	-2.7
3,102,906	+		Psest_2910	0.66	-0.8
3,102,907	-		Psest_2910	0.66	-0.3
3,102,907	-		Psest_2910	0.66	+1.1
3,102,907	-		Psest_2910	0.66	-0.0
3,102,907	-		Psest_2910	0.66	+1.3
3,102,907	-		Psest_2910	0.66	+0.7
3,102,907	-		Psest_2910	0.66	+0.9
3,102,909	+		Psest_2910	0.66	+0.9
3,102,981	+		Psest_2910	0.69	-1.7
3,102,981	+		Psest_2910	0.69	-0.7
3,102,982	-		Psest_2910	0.69	-0.6
3,102,995	-		Psest_2910	0.70	+1.4
3,103,134	+		Psest_2910	0.77	+2.1
3,103,149	+		Psest_2910	0.77	+0.1
3,103,150	-		Psest_2910	0.77	-0.2
3,103,152	+		Psest_2910	0.78	+0.0
3,103,153	-		Psest_2910	0.78	-1.1
3,103,194	+		Psest_2910	0.80	-0.7
3,103,194	+		Psest_2910	0.80	+1.6
3,103,194	+		Psest_2910	0.80	+0.4
3,103,194	+		Psest_2910	0.80	+1.1
3,103,195	-		Psest_2910	0.80	-1.6
3,103,195	-		Psest_2910	0.80	-0.7
3,103,195	-		Psest_2910	0.80	+1.7
3,103,227	+		Psest_2910	0.81	-0.9
3,103,227	+		Psest_2910	0.81	+0.6
3,103,228	-		Psest_2910	0.81	-0.0
3,103,232	-		Psest_2910	0.81	+1.6
3,103,232	-		Psest_2910	0.81	+0.9
3,103,435	+				+0.9
3,103,436	-				+0.1
3,103,437	+				+0.9
3,103,437	+				+1.1
3,103,437	+				-0.7
3,103,437	+				+0.7
3,103,437	+				+1.4
3,103,437	+				-0.1
3,103,437	+				-0.4
3,103,437	+				-1.1
3,103,437	+				+0.5
3,103,437	+				+0.9
3,103,438	-				-1.2
3,103,438	-				-1.2
3,103,438	-				+1.8
3,103,438	-				+0.6
3,103,438	-				-0.0
3,103,438	-				-1.3
3,103,438	-				-0.1
3,103,438	-				+1.1
3,103,438	-				+1.4
3,103,438	-				-2.0
3,103,438	-				-0.4
3,103,438	-				-0.9
3,103,438	-				-2.0
3,103,521	-				+1.9
3,103,521	-				-0.9
3,103,635	+				+0.3
3,103,635	+				-0.2
3,103,635	+				+1.0
3,103,635	+				+3.1
3,103,636	-				-3.3
3,103,636	-				+0.2
3,103,636	-				-1.0
3,103,636	-				-0.2
3,103,638	+				-0.9
3,103,638	+				-0.3
3,103,639	-				-0.7
3,103,639	-				+0.3
3,103,639	-				-0.1
3,103,639	-				-1.1
3,103,658	+				-0.6
3,103,736	+				-0.5
3,103,736	+				+0.9
3,103,737	-				-0.6
3,103,776	+				-2.0
3,103,800	-				+0.5
3,103,804	+				+0.8
3,103,805	-				+0.6
3,103,863	+				+1.4
3,103,895	-				+1.7
3,103,896	+				+0.4
3,103,896	+				+0.0
3,103,896	+				-0.3
3,103,900	+				+2.0
3,103,900	+				-1.5
3,103,943	-				+0.2
3,104,003	+				-1.3
3,104,041	-				+0.2
3,104,049	-				-1.0
3,104,052	+				+0.3
3,104,053	-				+1.8
3,104,162	+				+0.7
3,104,163	-				-0.1
3,104,337	-		Psest_2911	0.86	+0.6
3,104,337	-		Psest_2911	0.86	-0.2
3,104,337	-		Psest_2911	0.86	-0.2
3,104,536	+		Psest_2912	0.29	-0.5
3,104,536	+		Psest_2912	0.29	+0.2
3,104,536	+		Psest_2912	0.29	-0.4
3,104,536	+		Psest_2912	0.29	+0.6
3,104,536	+		Psest_2912	0.29	+1.3
3,104,536	+		Psest_2912	0.29	+0.6
3,104,537	-		Psest_2912	0.29	-0.2