Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4239 and Psest_4240 are separated by 167 nucleotides Psest_4240 and Psest_4241 are separated by 307 nucleotides Psest_4241 and Psest_4242 are separated by 20 nucleotides
Psest_4239: Psest_4239 - Cytochrome b, at 4,423,207 to 4,423,902
_4239
Psest_4240: Psest_4240 - tRNA_Arg_CCG, at 4,424,070 to 4,424,146
_4240
Psest_4241: Psest_4241 - hypothetical protein, at 4,424,454 to 4,424,588
_4241
Psest_4242: Psest_4242 - type VI secretion system FHA domain protein, at 4,424,609 to 4,425,805
_4242
Position (kb)
4424
4425 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4423.660 kb on + strand, within Psest_4239 at 4423.660 kb on + strand, within Psest_4239 at 4423.660 kb on + strand, within Psest_4239 at 4423.660 kb on + strand, within Psest_4239 at 4423.660 kb on + strand, within Psest_4239 at 4423.661 kb on - strand, within Psest_4239 at 4423.661 kb on - strand, within Psest_4239 at 4423.661 kb on - strand, within Psest_4239 at 4423.661 kb on - strand, within Psest_4239 at 4423.661 kb on - strand, within Psest_4239 at 4423.661 kb on - strand, within Psest_4239 at 4423.661 kb on - strand, within Psest_4239 at 4423.661 kb on - strand, within Psest_4239 at 4423.664 kb on + strand, within Psest_4239 at 4423.664 kb on + strand, within Psest_4239 at 4423.664 kb on + strand, within Psest_4239 at 4423.664 kb on + strand, within Psest_4239 at 4423.664 kb on + strand, within Psest_4239 at 4423.665 kb on - strand, within Psest_4239 at 4423.665 kb on - strand, within Psest_4239 at 4423.665 kb on - strand, within Psest_4239 at 4423.665 kb on - strand, within Psest_4239 at 4423.665 kb on - strand, within Psest_4239 at 4423.665 kb on - strand, within Psest_4239 at 4423.665 kb on - strand, within Psest_4239 at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.051 kb on + strand at 4424.147 kb on + strand at 4424.147 kb on + strand at 4424.147 kb on + strand at 4424.147 kb on + strand at 4424.147 kb on + strand at 4424.147 kb on + strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.148 kb on - strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.149 kb on + strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.150 kb on - strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.151 kb on + strand at 4424.152 kb on - strand at 4424.152 kb on - strand at 4424.152 kb on - strand at 4424.152 kb on - strand at 4424.152 kb on - strand at 4424.327 kb on + strand at 4424.327 kb on + strand at 4424.328 kb on - strand at 4424.328 kb on - strand at 4424.469 kb on + strand, within Psest_4241 at 4424.469 kb on + strand, within Psest_4241 at 4424.469 kb on + strand, within Psest_4241 at 4424.469 kb on + strand, within Psest_4241 at 4424.470 kb on - strand, within Psest_4241 at 4424.523 kb on + strand, within Psest_4241 at 4424.523 kb on + strand, within Psest_4241 at 4424.524 kb on - strand, within Psest_4241 at 4424.524 kb on - strand, within Psest_4241 at 4424.544 kb on + strand, within Psest_4241 at 4424.586 kb on + strand at 4424.888 kb on + strand, within Psest_4242 at 4425.047 kb on + strand, within Psest_4242 at 4425.047 kb on + strand, within Psest_4242 at 4425.047 kb on + strand, within Psest_4242 at 4425.047 kb on + strand, within Psest_4242 at 4425.047 kb on + strand, within Psest_4242 at 4425.047 kb on + strand, within Psest_4242 at 4425.047 kb on + strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.048 kb on - strand, within Psest_4242 at 4425.113 kb on + strand, within Psest_4242 at 4425.113 kb on + strand, within Psest_4242 at 4425.114 kb on - strand, within Psest_4242 at 4425.114 kb on - strand, within Psest_4242 at 4425.263 kb on - strand, within Psest_4242
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 4,423,660 + Psest_4239 0.65 -0.4 4,423,660 + Psest_4239 0.65 -1.7 4,423,660 + Psest_4239 0.65 -0.0 4,423,660 + Psest_4239 0.65 -1.6 4,423,660 + Psest_4239 0.65 -0.2 4,423,661 - Psest_4239 0.65 -0.8 4,423,661 - Psest_4239 0.65 -1.6 4,423,661 - Psest_4239 0.65 +1.5 4,423,661 - Psest_4239 0.65 +0.3 4,423,661 - Psest_4239 0.65 +1.6 4,423,661 - Psest_4239 0.65 -0.6 4,423,661 - Psest_4239 0.65 +0.6 4,423,661 - Psest_4239 0.65 +0.4 4,423,664 + Psest_4239 0.66 -0.6 4,423,664 + Psest_4239 0.66 +1.2 4,423,664 + Psest_4239 0.66 +0.1 4,423,664 + Psest_4239 0.66 +1.5 4,423,664 + Psest_4239 0.66 +0.3 4,423,665 - Psest_4239 0.66 -0.6 4,423,665 - Psest_4239 0.66 -0.9 4,423,665 - Psest_4239 0.66 -0.3 4,423,665 - Psest_4239 0.66 -0.4 4,423,665 - Psest_4239 0.66 -0.9 4,423,665 - Psest_4239 0.66 +0.4 4,423,665 - Psest_4239 0.66 +0.9 4,424,051 + +1.1 4,424,051 + -2.0 4,424,051 + -1.8 4,424,051 + -0.2 4,424,051 + -0.6 4,424,051 + -0.5 4,424,051 + +0.6 4,424,051 + -1.6 4,424,051 + +0.1 4,424,051 + +0.9 4,424,051 + -0.0 4,424,147 + -1.2 4,424,147 + +0.3 4,424,147 + -0.5 4,424,147 + -1.1 4,424,147 + +1.5 4,424,147 + +0.9 4,424,148 - +0.5 4,424,148 - -0.5 4,424,148 - -0.3 4,424,148 - -1.0 4,424,148 - -0.5 4,424,148 - -1.0 4,424,148 - -0.3 4,424,148 - +0.2 4,424,148 - -1.3 4,424,148 - -1.7 4,424,148 - -0.2 4,424,148 - +0.2 4,424,148 - +0.6 4,424,149 + +0.3 4,424,149 + -0.3 4,424,149 + -1.8 4,424,149 + +1.3 4,424,149 + +0.1 4,424,149 + +0.3 4,424,149 + -0.9 4,424,149 + +0.2 4,424,149 + -0.7 4,424,149 + +0.6 4,424,149 + -1.1 4,424,149 + -0.7 4,424,149 + -1.1 4,424,149 + -0.3 4,424,149 + -0.8 4,424,149 + -0.1 4,424,149 + -0.0 4,424,149 + -0.5 4,424,149 + -1.5 4,424,149 + +0.9 4,424,149 + +1.9 4,424,149 + +2.3 4,424,149 + -0.6 4,424,149 + +0.3 4,424,149 + -0.4 4,424,149 + +0.1 4,424,149 + +0.4 4,424,149 + -0.6 4,424,149 + -0.8 4,424,149 + -0.1 4,424,149 + +1.1 4,424,149 + -0.3 4,424,149 + -1.2 4,424,149 + -0.8 4,424,149 + +0.7 4,424,149 + +1.1 4,424,149 + +0.7 4,424,149 + +1.5 4,424,149 + +0.6 4,424,149 + -0.3 4,424,149 + -0.1 4,424,149 + -1.2 4,424,149 + -1.8 4,424,149 + +0.4 4,424,149 + +0.9 4,424,149 + -0.5 4,424,149 + -1.7 4,424,149 + +1.3 4,424,149 + +0.7 4,424,149 + +0.4 4,424,149 + -0.2 4,424,149 + -0.3 4,424,149 + -1.0 4,424,149 + +1.3 4,424,149 + +1.8 4,424,149 + +0.5 4,424,150 - +0.7 4,424,150 - -0.1 4,424,150 - +0.4 4,424,150 - +0.2 4,424,150 - +0.7 4,424,150 - +1.2 4,424,150 - -0.1 4,424,150 - -0.8 4,424,150 - -2.1 4,424,150 - -1.5 4,424,150 - -0.5 4,424,150 - +0.7 4,424,150 - +1.7 4,424,150 - +0.5 4,424,150 - +1.2 4,424,150 - -0.6 4,424,150 - +0.8 4,424,150 - -1.4 4,424,150 - -0.1 4,424,150 - +0.3 4,424,150 - +0.3 4,424,150 - -0.1 4,424,150 - +0.2 4,424,150 - -1.3 4,424,150 - +0.5 4,424,150 - +0.3 4,424,150 - +1.1 4,424,150 - -0.7 4,424,150 - +3.6 4,424,150 - +0.7 4,424,150 - -1.1 4,424,150 - +0.6 4,424,150 - -1.1 4,424,150 - -1.0 4,424,150 - -1.2 4,424,150 - -0.8 4,424,150 - +0.8 4,424,150 - +0.1 4,424,150 - -0.1 4,424,150 - -1.2 4,424,150 - +2.3 4,424,150 - -0.9 4,424,150 - +0.4 4,424,150 - +1.1 4,424,150 - +1.1 4,424,150 - -2.0 4,424,150 - -1.1 4,424,150 - -1.8 4,424,150 - -1.0 4,424,150 - +1.7 4,424,150 - +0.1 4,424,150 - -1.8 4,424,150 - -0.5 4,424,150 - -0.7 4,424,150 - -0.3 4,424,151 + +0.1 4,424,151 + +0.2 4,424,151 + +0.6 4,424,151 + -0.1 4,424,151 + +0.9 4,424,151 + +0.6 4,424,151 + +0.6 4,424,151 + -1.1 4,424,151 + -0.8 4,424,151 + +1.7 4,424,152 - -1.8 4,424,152 - +0.5 4,424,152 - +2.0 4,424,152 - +1.5 4,424,152 - -1.4 4,424,327 + -1.0 4,424,327 + -1.1 4,424,328 - -0.4 4,424,328 - +2.3 4,424,469 + Psest_4241 0.11 -0.5 4,424,469 + Psest_4241 0.11 -0.5 4,424,469 + Psest_4241 0.11 +0.3 4,424,469 + Psest_4241 0.11 +1.5 4,424,470 - Psest_4241 0.12 +2.0 4,424,523 + Psest_4241 0.51 +3.7 4,424,523 + Psest_4241 0.51 -0.1 4,424,524 - Psest_4241 0.52 +0.6 4,424,524 - Psest_4241 0.52 +2.1 4,424,544 + Psest_4241 0.67 -0.6 4,424,586 + +0.6 4,424,888 + Psest_4242 0.23 -1.4 4,425,047 + Psest_4242 0.37 -0.0 4,425,047 + Psest_4242 0.37 -0.0 4,425,047 + Psest_4242 0.37 +0.3 4,425,047 + Psest_4242 0.37 -1.2 4,425,047 + Psest_4242 0.37 -0.4 4,425,047 + Psest_4242 0.37 +0.4 4,425,047 + Psest_4242 0.37 -1.4 4,425,048 - Psest_4242 0.37 +0.3 4,425,048 - Psest_4242 0.37 +2.2 4,425,048 - Psest_4242 0.37 -1.3 4,425,048 - Psest_4242 0.37 -0.6 4,425,048 - Psest_4242 0.37 -1.4 4,425,048 - Psest_4242 0.37 -0.2 4,425,048 - Psest_4242 0.37 -0.3 4,425,048 - Psest_4242 0.37 -0.1 4,425,048 - Psest_4242 0.37 -0.6 4,425,048 - Psest_4242 0.37 -0.1 4,425,113 + Psest_4242 0.42 -0.5 4,425,113 + Psest_4242 0.42 +1.9 4,425,114 - Psest_4242 0.42 +1.7 4,425,114 - Psest_4242 0.42 +1.1 4,425,263 - Psest_4242 0.55 +0.9
Or see this region's nucleotide sequence