Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4137 and Psest_4138 overlap by 4 nucleotides Psest_4138 and Psest_4139 overlap by 38 nucleotides
Psest_4137: Psest_4137 - Uncharacterized iron-regulated membrane protein, at 4,318,764 to 4,319,891
_4137
Psest_4138: Psest_4138 - hypothetical protein, at 4,319,888 to 4,320,109
_4138
Psest_4139: Psest_4139 - PAS domain S-box, at 4,320,072 to 4,322,858
_4139
Position (kb)
4319
4320
4321 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4318.981 kb on - strand, within Psest_4137 at 4319.002 kb on - strand, within Psest_4137 at 4319.002 kb on - strand, within Psest_4137 at 4319.037 kb on + strand, within Psest_4137 at 4319.037 kb on + strand, within Psest_4137 at 4319.038 kb on - strand, within Psest_4137 at 4319.038 kb on - strand, within Psest_4137 at 4319.038 kb on - strand, within Psest_4137 at 4319.106 kb on - strand, within Psest_4137 at 4319.160 kb on + strand, within Psest_4137 at 4319.160 kb on + strand, within Psest_4137 at 4319.182 kb on - strand, within Psest_4137 at 4319.405 kb on + strand, within Psest_4137 at 4319.405 kb on + strand, within Psest_4137 at 4319.405 kb on + strand, within Psest_4137 at 4319.406 kb on - strand, within Psest_4137 at 4319.480 kb on - strand, within Psest_4137 at 4319.480 kb on - strand, within Psest_4137 at 4319.730 kb on + strand, within Psest_4137 at 4319.730 kb on + strand, within Psest_4137 at 4319.731 kb on - strand, within Psest_4137 at 4319.850 kb on + strand at 4319.850 kb on + strand at 4319.851 kb on - strand at 4319.851 kb on - strand at 4320.149 kb on + strand at 4320.310 kb on + strand at 4320.476 kb on - strand, within Psest_4139 at 4320.716 kb on - strand, within Psest_4139 at 4320.831 kb on + strand, within Psest_4139 at 4320.831 kb on + strand, within Psest_4139 at 4320.831 kb on + strand, within Psest_4139 at 4320.831 kb on + strand, within Psest_4139 at 4320.831 kb on + strand, within Psest_4139 at 4320.831 kb on + strand at 4320.832 kb on - strand, within Psest_4139 at 4320.832 kb on - strand, within Psest_4139 at 4320.832 kb on - strand, within Psest_4139 at 4320.832 kb on - strand, within Psest_4139 at 4320.860 kb on - strand, within Psest_4139 at 4320.895 kb on + strand, within Psest_4139 at 4320.896 kb on - strand, within Psest_4139 at 4320.906 kb on - strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.060 kb on + strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.061 kb on - strand, within Psest_4139 at 4321.097 kb on - strand, within Psest_4139 at 4321.097 kb on - strand, within Psest_4139 at 4321.097 kb on - strand, within Psest_4139
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 4,318,981 - Psest_4137 0.19 -1.3 4,319,002 - Psest_4137 0.21 +0.8 4,319,002 - Psest_4137 0.21 -0.3 4,319,037 + Psest_4137 0.24 -0.7 4,319,037 + Psest_4137 0.24 +0.5 4,319,038 - Psest_4137 0.24 -0.2 4,319,038 - Psest_4137 0.24 -1.8 4,319,038 - Psest_4137 0.24 +0.1 4,319,106 - Psest_4137 0.30 -1.9 4,319,160 + Psest_4137 0.35 +1.4 4,319,160 + Psest_4137 0.35 +1.3 4,319,182 - Psest_4137 0.37 -0.7 4,319,405 + Psest_4137 0.57 +0.0 4,319,405 + Psest_4137 0.57 +1.1 4,319,405 + Psest_4137 0.57 -1.3 4,319,406 - Psest_4137 0.57 -0.0 4,319,480 - Psest_4137 0.63 -2.1 4,319,480 - Psest_4137 0.63 +0.3 4,319,730 + Psest_4137 0.86 -0.7 4,319,730 + Psest_4137 0.86 +0.5 4,319,731 - Psest_4137 0.86 +2.3 4,319,850 + -0.7 4,319,850 + +0.6 4,319,851 - +0.4 4,319,851 - +0.3 4,320,149 + -1.5 4,320,310 + -1.4 4,320,476 - Psest_4139 0.14 -0.7 4,320,716 - Psest_4139 0.23 -1.6 4,320,831 + Psest_4139 0.27 -1.4 4,320,831 + Psest_4139 0.27 +0.8 4,320,831 + Psest_4139 0.27 -0.2 4,320,831 + Psest_4139 0.27 +0.2 4,320,831 + Psest_4139 0.27 +0.4 4,320,831 + +1.0 4,320,832 - Psest_4139 0.27 -1.1 4,320,832 - Psest_4139 0.27 +0.3 4,320,832 - Psest_4139 0.27 -0.4 4,320,832 - Psest_4139 0.27 -0.2 4,320,860 - Psest_4139 0.28 -0.8 4,320,895 + Psest_4139 0.30 +0.2 4,320,896 - Psest_4139 0.30 -2.3 4,320,906 - Psest_4139 0.30 -0.9 4,321,060 + Psest_4139 0.35 +3.5 4,321,060 + Psest_4139 0.35 +1.2 4,321,060 + Psest_4139 0.35 +0.5 4,321,060 + Psest_4139 0.35 +2.5 4,321,060 + Psest_4139 0.35 +0.8 4,321,060 + Psest_4139 0.35 -0.8 4,321,060 + Psest_4139 0.35 +0.1 4,321,060 + Psest_4139 0.35 -1.1 4,321,060 + Psest_4139 0.35 +0.0 4,321,060 + Psest_4139 0.35 -1.6 4,321,060 + Psest_4139 0.35 +2.0 4,321,060 + Psest_4139 0.35 +0.0 4,321,060 + Psest_4139 0.35 -0.2 4,321,060 + Psest_4139 0.35 +0.3 4,321,060 + Psest_4139 0.35 -0.0 4,321,060 + Psest_4139 0.35 -1.4 4,321,061 - Psest_4139 0.35 -1.4 4,321,061 - Psest_4139 0.35 -0.1 4,321,061 - Psest_4139 0.35 -2.2 4,321,061 - Psest_4139 0.35 -1.3 4,321,061 - Psest_4139 0.35 -0.8 4,321,061 - Psest_4139 0.35 +3.0 4,321,061 - Psest_4139 0.35 -1.8 4,321,061 - Psest_4139 0.35 -1.4 4,321,061 - Psest_4139 0.35 -1.2 4,321,097 - Psest_4139 0.37 -1.1 4,321,097 - Psest_4139 0.37 -1.0 4,321,097 - Psest_4139 0.37 -1.5
Or see this region's nucleotide sequence