Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2552 and Psest_2553 are separated by 198 nucleotides Psest_2553 and Psest_2554 are separated by 38 nucleotides
Psest_2552: Psest_2552 - hypothetical protein, at 2,732,450 to 2,733,805
_2552
Psest_2553: Psest_2553 - SnoaL-like polyketide cyclase., at 2,734,004 to 2,734,426
_2553
Psest_2554: Psest_2554 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 2,734,465 to 2,736,495
_2554
Position (kb)
2734
2735 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2733.303 kb on + strand, within Psest_2552 at 2733.304 kb on - strand, within Psest_2552 at 2733.657 kb on + strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.660 kb on - strand, within Psest_2552 at 2733.773 kb on + strand at 2733.774 kb on - strand at 2734.001 kb on - strand at 2734.290 kb on + strand, within Psest_2553 at 2734.388 kb on - strand at 2734.413 kb on - strand at 2734.426 kb on + strand at 2734.427 kb on - strand at 2734.430 kb on + strand at 2734.430 kb on + strand at 2734.431 kb on - strand at 2734.431 kb on - strand at 2734.431 kb on - strand at 2734.431 kb on - strand at 2734.697 kb on + strand, within Psest_2554 at 2734.698 kb on - strand, within Psest_2554 at 2734.812 kb on - strand, within Psest_2554 at 2734.812 kb on - strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.950 kb on - strand, within Psest_2554 at 2734.950 kb on - strand, within Psest_2554 at 2734.950 kb on - strand, within Psest_2554 at 2734.950 kb on - strand, within Psest_2554 at 2735.037 kb on - strand, within Psest_2554 at 2735.201 kb on + strand, within Psest_2554 at 2735.202 kb on - strand, within Psest_2554 at 2735.202 kb on - strand, within Psest_2554 at 2735.202 kb on - strand, within Psest_2554 at 2735.216 kb on + strand, within Psest_2554 at 2735.217 kb on - strand, within Psest_2554 at 2735.217 kb on - strand, within Psest_2554 at 2735.217 kb on - strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.391 kb on - strand, within Psest_2554 at 2735.391 kb on - strand, within Psest_2554 at 2735.391 kb on - strand, within Psest_2554 at 2735.391 kb on - strand, within Psest_2554
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,733,303 + Psest_2552 0.63 +1.4 2,733,304 - Psest_2552 0.63 +0.1 2,733,657 + Psest_2552 0.89 +0.8 2,733,658 - Psest_2552 0.89 -1.1 2,733,658 - Psest_2552 0.89 -1.0 2,733,658 - Psest_2552 0.89 -0.2 2,733,658 - Psest_2552 0.89 -0.9 2,733,658 - Psest_2552 0.89 -0.1 2,733,660 - Psest_2552 0.89 -0.1 2,733,773 + -0.5 2,733,774 - +0.6 2,734,001 - -1.2 2,734,290 + Psest_2553 0.68 +0.7 2,734,388 - -0.1 2,734,413 - -0.8 2,734,426 + -1.2 2,734,427 - +0.5 2,734,430 + -1.1 2,734,430 + +0.7 2,734,431 - +2.3 2,734,431 - -0.2 2,734,431 - +1.0 2,734,431 - -0.2 2,734,697 + Psest_2554 0.11 -1.4 2,734,698 - Psest_2554 0.11 -0.8 2,734,812 - Psest_2554 0.17 -0.4 2,734,812 - Psest_2554 0.17 -0.7 2,734,949 + Psest_2554 0.24 -0.2 2,734,949 + Psest_2554 0.24 -0.3 2,734,949 + Psest_2554 0.24 -0.2 2,734,949 + Psest_2554 0.24 -0.5 2,734,949 + Psest_2554 0.24 +0.9 2,734,950 - Psest_2554 0.24 +3.2 2,734,950 - Psest_2554 0.24 -0.3 2,734,950 - Psest_2554 0.24 +1.9 2,734,950 - Psest_2554 0.24 +0.9 2,735,037 - Psest_2554 0.28 -0.6 2,735,201 + Psest_2554 0.36 +1.0 2,735,202 - Psest_2554 0.36 -2.5 2,735,202 - Psest_2554 0.36 +0.9 2,735,202 - Psest_2554 0.36 +0.9 2,735,216 + Psest_2554 0.37 +0.8 2,735,217 - Psest_2554 0.37 -0.4 2,735,217 - Psest_2554 0.37 -1.5 2,735,217 - Psest_2554 0.37 -0.2 2,735,390 + Psest_2554 0.46 +0.2 2,735,390 + Psest_2554 0.46 +0.0 2,735,390 + Psest_2554 0.46 -0.5 2,735,390 + Psest_2554 0.46 -1.1 2,735,390 + Psest_2554 0.46 -3.1 2,735,390 + Psest_2554 0.46 -2.3 2,735,390 + Psest_2554 0.46 -0.7 2,735,391 - Psest_2554 0.46 -0.4 2,735,391 - Psest_2554 0.46 +1.9 2,735,391 - Psest_2554 0.46 -2.0 2,735,391 - Psest_2554 0.46 -1.2
Or see this region's nucleotide sequence