Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0212 and Psest_0213 overlap by 4 nucleotides Psest_0213 and Psest_0214 are separated by 70 nucleotides
Psest_0212: Psest_0212 - exodeoxyribonuclease V, gamma subunit, at 213,329 to 216,628
_0212
Psest_0213: Psest_0213 - exodeoxyribonuclease V, beta subunit, at 216,625 to 220,173
_0213
Psest_0214: Psest_0214 - exodeoxyribonuclease V, alpha subunit, at 220,244 to 222,091
_0214
Position (kb)
216
217
218
219
220
221 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 220.241 kb on + strand at 220.241 kb on + strand at 220.241 kb on + strand at 220.241 kb on + strand at 220.242 kb on - strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 220,241 + -0.2 220,241 + +0.5 220,241 + +0.1 220,241 + +0.4 220,242 - -1.2 220,243 + +0.1 220,243 + -1.4 220,243 + +0.1 220,243 + +1.0 220,243 + -1.4 220,243 + +0.2 220,243 + -1.4 220,243 + +0.6 220,243 + -0.4 220,243 + +3.9 220,243 + -0.9 220,243 + -0.9 220,243 + -0.9 220,243 + +1.1 220,243 + +1.2 220,243 + -2.8 220,243 + -0.8 220,244 - +0.0 220,244 - +2.8 220,244 - -0.2 220,244 - +0.6 220,244 - +1.2 220,244 - +0.8 220,244 - +0.2 220,244 - -1.4 220,244 - +0.8 220,244 - -0.1 220,244 - +0.3 220,244 - -1.1 220,244 - -1.0 220,244 - +2.0 220,244 - -1.0 220,244 - +0.4 220,244 - -0.6
Or see this region's nucleotide sequence